Evidence map›Paper›PMID 16145113›Full record

ArticleJournal of clinical microbiology2005

Comparison of methods for detection of vaccinia virus in patient specimens.

Daniel P Fedorko, Jeanne C Preuss, Gary A Fahle, Li Li, Steven H Fischer, Patricia Hohman, Jeffrey I Cohen

Abstract readComparative StudyEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Daniel P FedorkoWarren G. Magnuson Clinical Center, National Institutes for Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892-1508, USA. dfedorko@nih.gov
Jeanne C Preuss
Gary A Fahle
Li Li
Steven H Fischer
Patricia Hohman
Jeffrey I Cohen

Funding

Immune Responses to Vaccinia Virus VaccinationZ01AI000923 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI COHEN, JEFFREY · 2003 to 2008
$863k
Immune Responses to Vaccinia Virus VaccinationZIAAI000923 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI COHEN, JEFFREY · 2009 to 2014
$822k
6 · The paper itself

Abstract

We analyzed a shell vial culture assay (SVA), real-time PCR, and a direct fluorescent antibody assay (DFA) for rapid detection of vaccinia virus from vaccination sites of Dryvax vaccine recipients. Of 47 samples assayed, 100% were positive by PCR, 89% were positive by SVA, and 40% were positive by DFA. DFA was limited by the need for adequate numbers of cells, with 32% of samples inadequate for interpretation. DFA performed better with specimens from patients who had not previously received the vaccine. PCR was positive for longer times postvaccination than was SVA. Infectious virus could be recovered after 45 min of acetone fixation of shell vial coverslips. Commercially available polyclonal antibodies cross-reacted with other orthopoxviruses and herpes simplex 1, but commercially available monoclonal antibodies were specific for vaccinia virus. In summary, PCR was the most sensitive test for detecting vaccinia virus in clinical specimens, while the DFA was the most rapid but the least sensitive test.

Indexed as

AnimalsAntibodies, ViralCell LineChlorocebus aethiopsCricetinaeFluorescent Antibody Technique, DirectHeLa CellsHumansPolymerase Chain ReactionSkinSmallpoxSmallpox VaccineSpecimen HandlingVaccinationVacciniaVaccinia virusAntibodies, ViralSmallpox Vaccine

Identifiers

PMID16145113
PMCPMC1234082

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.