Evidence map›Paper›PMID 16143625›Full record

ArticleGenetics2005

Mechanisms of genetic exchange within the chromosomal inversions of Drosophila pseudoobscura.

Stephen W Schaeffer, Wyatt W Anderson

Abstract readComparative Study
In one paragraph

Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed.

  1. Article
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  6. Chromosomal inversions and their impact on insect evolution.Current opinion in insect science · 2024
    Review
  7. Article
  8. The recombination landscape of introgression in yeast.bioRxiv : the preprint server for biology · 2024
    Article
  9. Supergene origin and maintenance in Atlantic cod.Nature ecology & evolution · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Stephen W SchaefferDepartment of Biology and Institute of Molecular Evolutionary Genetics, Pennsylvania State University, 208 Erwin W. Mueller Laboratories, University Park, PA 16802-5301, USA. sws4@psu.edu
Wyatt W Anderson

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have used the inversion system of Drosophila pseudoobscura to investigate how genetic flux occurs among the gene arrangements. The patterns of nucleotide polymorphism at seven loci were used to infer gene conversion events between pairs of different gene arrangements. We estimate that the average gene conversion tract length is 205 bp and that the average conversion rate is 3.4 x 10(-6), which is 2 orders of magnitude greater than the mutation rate. We did not detect gene conversion events between all combinations of gene arrangements even though there was sufficient nucleotide variation for detection and sufficient opportunity for exchanges to occur. Genetic flux across the inverted chromosome resulted in higher levels of differentiation within 0.1 Mb of inversion breakpoints, but a slightly lower level of differentiation in central inverted regions. No gene conversion events were detected within 17 kb of an inversion breakpoint suggesting that the formation of double-strand breaks is reduced near rearrangement breakpoints in heterozygotes. At least one case where selection rather than proximity to an inversion breakpoint is responsible for reduction in polymorphism was identified.

Indexed as

AnimalsChromosome InversionDrosophilaDrosophila ProteinsGene ConversionGene OrderMutationPhysical Chromosome MappingPolymorphism, GeneticSelection, GeneticDrosophila Proteins

Identifiers

PMID16143625
PMCPMC1456099

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.