Evidence map›Paper›PMID 16143617›Full record

ArticleGenetics2005

Capture of extranuclear DNA at fission yeast double-strand breaks.

Anabelle Decottignies

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
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  5. Genetic interaction of the histone chaperonemicroPublication biology · 2022
    Article
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  9. Genes · 2020
    Review
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  11. Article
  12. Article
  13. Article
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  15. Article
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  18. Yeast Tdp1 regulates the fidelity of nonhomologous end joining.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Anabelle DecottigniesCellular Genetics, Christian de Duve Institute of Cellular Pathology, Catholic University of Louvain, Avenue Hippocrate 74+3, 1200 Brussels, Belgium. anabelle.decottignies@gece.ucl.ac.be
UCLouvain · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proper repair of DNA double-strand breaks (DSBs) is necessary for the maintenance of genomic integrity. Here, a new simple assay was used to study extrachromosomal DSB repair in Schizosaccharomyces pombe. Strikingly, DSB repair was associated with the capture of fission yeast mitochondrial DNA (mtDNA) at high frequency. Capture of mtDNA fragments required the Lig4p/Pku70p nonhomologous end-joining (NHEJ) machinery and its frequency was highly increased in fission yeast cells grown to stationary phase. The fission yeast Mre11 complex Rad32p/Rad50p/Nbs1p was also required for efficient capture of mtDNA at DSBs, supporting a role for the complex in promoting intermolecular ligation. Competition assays further revealed that microsatellite DNA from higher eukaryotes was preferentially captured at yeast DSBs. Finally, cotransformation experiments indicated that, in NHEJ-deficient cells, capture of extranuclear DNA at DSBs was observed if homologies--as short as 8 bp--were present between DNA substrate and DSB ends. Hence, whether driven by NHEJ, microhomology-mediated end-joining, or homologous recombination, DNA capture associated with DSB repair is a mutagenic process threatening genomic stability.

Indexed as

Base SequenceChromosomal Proteins, Non-HistoneComputational BiologyDNA DamageDNA Ligase ATPDNA LigasesDNA, MitochondrialDNA PrimersDNA RepairExodeoxyribonucleasesGenome, FungalMicrosatellite RepeatsMicroscopy, FluorescenceMolecular Sequence DataMutagenesisSchizosaccharomycesChromosomal Proteins, Non-HistoneDNA Ligase ATPDNA LigasesDNA, MitochondrialDNA PrimersExodeoxyribonucleasesMre11 protein, S pombeNbs1 protein, S pombeRad50 protein, S pombeSchizosaccharomyces pombe Proteinsura4 protein, S pombe

Identifiers

PMID16143617
PMCPMC1456082
OpenAlexW1963983203

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.