Evidence map›Paper›PMID 16143603›Full record

ArticleGenetics2005

Natural and synthetic alleles provide complementary insights into the nature of selection acting on the Men polymorphism of Drosophila melanogaster.

Thomas J S Merritt, David Duvernell, Walter F Eanes

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.6field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Thomas J S MerrittDepartment of Ecology and Evolution, Life Sciences Building, Stony Brook University, Stony Brook, NY 11794, USA. merritt@life.bio.sunysb.edu
David Duvernell
Walter F Eanes
Stony Brook University · USSouthern Illinois University Edwardsville · US

Funding

METABOLIC CONTROL AND MOLECULAR ADAPTATION IN DROSOPHILAR01GM045247 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI EANES, WALTER F. · 1991 to 2005
$1.3M
NIGMS NIH HHS GM 45247NIGMS NIH HHS R01 GM045247
6 · The paper itself

Abstract

Two malic enzyme alleles, Men(113A) and Men(113G), occur at approximately equal frequency in North American populations of Drosophila melanogaster, while only Men(113A) occurs in African populations. We investigated the population genetics, biochemical characteristics, and selective potential of these alleles. Comparable levels of nucleotide polymorphism in both alleles suggest that the Men(113G) allele is not recently derived, but we find no evidence in the DNA sequence data for selection maintaining the polymorphism. Interestingly, the alleles differ in both V(max) and K(m) for the substrate malate. Triglyceride concentration and isocitrate dehydrogenase (IDH) and glucose-6-phosphate dehydrogenase (G6PD) activities are negatively correlated with the in vivo activities of the Men alleles. We examined the causality of the observed correlations using P-element excision-derived knockout alleles of the Men gene and found significant changes in the maximum activities of both IDH and G6PD, but not in triglyceride concentration, suggesting compensatory interactions between MEN, IDH, and G6PD. Additionally, we found significantly higher than expected levels of MEN activity in knockout heterozygotes, which we attribute to transvection effects. The distinct differences in biochemistry and physiology between the naturally occurring alleles and between the engineered alleles suggest the potential for selection on the Men locus.

Indexed as

AllelesGenetics, PopulationPolymorphism, GeneticSelection, GeneticAnimalsBase SequenceDNA PrimersDrosophila melanogasterGene DeletionGlucosephosphate DehydrogenaseIsocitrate DehydrogenaseMalate DehydrogenaseMalatesMolecular Sequence DataSequence Analysis, DNADNA PrimersGlucosephosphate DehydrogenaseIsocitrate DehydrogenaseMalate Dehydrogenasemalate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)Malatesmalic acid

Identifiers

PMID16143603
PMCPMC1456097
OpenAlexW2140176309

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.