Evidence map›Paper›PMID 16138932›Full record

ArticleBMC genomics2005

Improved tagging strategy for protein identification in mammalian cells.

Agnieszka Bialkowska, Xian-Yang Zhang, Jakob Reiser

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Interplay among p21Scientific reports · 2020
    Article
  3. Review
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Agnieszka BialkowskaGene Therapy Program, Department of Medicine, Louisiana State University Health Sciences Center, New Orleans, Louisiana 70112, USA. abialk@lsuhsc.edu
Xian-Yang Zhang
Jakob Reiser
Louisiana State University Health Sciences Center New Orleans · US

Funding

Delivery of Therapeutic Enzymes and Genes to the CNSR01NS044832 · NINDS · LSU HEALTH SCIENCES CENTER · PI ZHANG, XIAN-YANG · 2003 to 2006
$913k
Protein trapping tools for mammalian cellsR21ES012026 · NIEHS · LOUISIANA STATE UNIV HSC NEW ORLEANS · PI REISER, JAKOB · 2002 to 2003
$426k
NIEHS NIH HHS ES 012026NINDS NIH HHS NS 044832NINDS NIH HHS R01 NS044832
6 · The paper itself

Abstract

backgroundThe tagging strategy enables full-length endogenous proteins in mammalian cells to be expressed as green fluorescent fusion proteins from their authentic promoters.

resultsWe describe improved genetic tools to facilitate protein tagging in mammalian cells based on a mobile genetic element that harbors an artificial exon encoding a protein tag. Insertion of the artificial exon within introns of cellular genes results in expression of hybrid proteins consisting of the tag sequence fused in-frame to sequences of a cellular protein. We have used lentiviral vectors to stably introduce enhanced green fluorescent protein (EGFP) tags into expressed genes in target cells. The data obtained indicate that this strategy leads to bona fide tripartite fusion proteins and that the EGFP tag did not affect the subcellular localization of such proteins.

conclusionThe tools presented here have the potential for protein discovery, and subsequent investigation of their subcellular distribution and role(s) under defined physiological conditions, as well as for protein purification and protein-protein interaction studies.

Indexed as

AnimalsBlotting, WesternCell LineCell Line, TumorCloning, MolecularExonsGenes, ReporterGenetic MarkersGenetic TechniquesGenetic VectorsGenomicsGreen Fluorescent ProteinsHumansLentivirusLuminescent ProteinsMicroscopy, Confocalenhanced green fluorescent proteinGenetic MarkersGreen Fluorescent ProteinsLuminescent ProteinsRecombinant Fusion ProteinsRNA

Identifiers

PMID16138932
PMCPMC1250225
OpenAlexW1861794084

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.