Evidence map›Paper›PMID 16136133›Full record

ArticleNature2005

Human subtelomeres are hot spots of interchromosomal recombination and segmental duplication.

Elena V Linardopoulou, Eleanor M Williams, Yuxin Fan, Cynthia Friedman, Janet M Young, Barbara J Trask

Abstract read
In one paragraph

Article in Nature, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 225 papers.

0numbers the graph read from it
0cells of the map it votes in
225citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

225 citing papers in PubMed.

  1. Article
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  4. Paralogs of thebioRxiv : the preprint server for biology · 2026
    Article
  5. Germline hypomethylation shapes dynamic CpG reservoirs in ape genomes.bioRxiv : the preprint server for biology · 2026
    Article
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  7. Article
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  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Maltose and Maltotriose Transporters in Brewer'sInternational journal of molecular sciences · 2025
    Review
  19. Article
  20. Epigenetic and evolutionary features of ape subterminal heterochromatin.bioRxiv : the preprint server for biology · 2025
    Article

165 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Elena V LinardopoulouDivision of Human Biology, Fred Hutchinson Cancer Research Center, 1100 Fairview Avenue North C3-168, Seattle, Washington 98109, USA.
Eleanor M Williams
Yuxin Fan
Cynthia Friedman
Janet M Young
Barbara J Trask

Funding

Structural, functional genomics olfactory receptor genesR01DC004209 · NIDCD · UNIVERSITY OF WASHINGTON · PI TRASK, BARBARA J. · 1999 to 2008
$5.9M
Variation, functions, and dynamics of human subtelomeresR01GM057070 · NIGMS · UNIVERSITY OF WASHINGTON · PI TAPSCOTT, STEPHEN J · 1997 to 2010
$4.4M
NIDCD NIH HHS R01 DC004209NIGMS NIH HHS R01 GM057070
6 · The paper itself

Abstract

Human subtelomeres are polymorphic patchworks of interchromosomal segmental duplications at the ends of chromosomes. Here we provide evidence that these patchworks arose recently through repeated translocations between chromosome ends. We assess the relative contribution of the principal mechanisms of ectopic DNA repair to the formation of subtelomeric duplications and find that non-homologous end-joining predominates. Once subtelomeric duplications arise, they are prone to homology-based sequence transfers as shown by the incongruent phylogenetic relationships of neighbouring sections. Interchromosomal recombination of subtelomeres is a potent force for recent change. Cytogenetic and sequence analyses reveal that pieces of the subtelomeric patchwork have changed location and copy number with unprecedented frequency during primate evolution. Half of the known subtelomeric sequence has formed recently, through human-specific sequence transfers and duplications. Subtelomeric dynamics result in a gene duplication rate significantly higher than the genome average and could have both advantageous and pathological consequences in human biology. More generally, our analyses suggest an evolutionary cycle between segmental polymorphisms and genome rearrangements.

Indexed as

Gene DuplicationAnimalsBase SequenceChromosome BreakageChromosomes, HumanComputational BiologyDNA RepairGenome, HumanGenomicsHumansModels, GeneticPolymorphism, GeneticPrimatesRecombination, GeneticSequence Homology, Nucleic AcidTelomere

Identifiers

PMID16136133
PMCPMC1368961

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.