Evidence map›Paper›PMID 1613457›Full record

ArticleThe Journal of experimental medicine1992

Analysis of a T cell receptor gene as a target of the somatic hypermutation mechanism.

J Hackett, C Stebbins, B Rogerson, M M Davis, U Storb

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Complex regulation of somatic hypermutation by cis-acting sequences in the endogenous IgH gene in hybridoma cells.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

J HackettDepartment of Molecular Genetics and Cell Biology, University of Chicago, Illinois 60637.
C Stebbins
B Rogerson
M M Davis
U Storb
University of Chicago · US

Funding

Molecular And Cellular Biology Training ProgramT32GM007183 · NIGMS · UNIVERSITY OF CHICAGO · PI GLICK, BENJAMIN S, RICE, PHOEBE A · 1985 to 2021
$23.9M
EXPRESSION OF IMMUNOGLOBULIN GENES IN TRANSGENIC MICER01HD023089 · NICHD · UNIVERSITY OF CHICAGO · PI STORB, URSULA B · 1986 to 2000
$275k
MUTATION OF IG GENES IN MYELOMA TUMORSR01GM038649 · NIGMS · UNIVERSITY OF CHICAGO · PI STORB, URSULA B · 1987 to 2000
$171k
NICHD NIH HHS HD-23089NIGMS NIH HHS GM-07183NIGMS NIH HHS GM-38649
6 · The paper itself

Abstract

In an effort to identify cis-acting elements required for targeting of the somatic hypermutation process in mice, we examined whether a T cell receptor (TCR) transgene under the control of the immunoglobulin (Ig) heavy (H) chain intron enhancer would be mutated in antigen-stimulated B cells. Hybridomas were established from splenic B cells of mice carrying two copies of the TCR transgene after hyperimmunization with phosphorylcholine keyhole limpet hemocyanin. Northern analysis revealed that all of the transgene-containing hybridomas expressed the TCR mRNA. Multiple somatic point mutations were found in seven of eight endogenous Ig VH genes examined. In contrast, 29 of 32 TCR genes examined contained no mutations. One potential mutation was seen in each of the three other TCR genes. Our data indicate that although the TCR transgene is expressed in B cells, it is not efficiently targeted by the mutator mechanism. Furthermore, the presence of an Ig H chain enhancer is itself not sufficient for targeting of the somatic hypermutation mechanism.

Indexed as

MutationAnimalsBase SequenceEnhancer Elements, GeneticGenes, ImmunoglobulinImmunoglobulin Heavy ChainsMiceMice, Inbred C3HMice, Inbred C57BLMice, TransgenicMolecular Sequence DataReceptors, Antigen, T-CellImmunoglobulin Heavy ChainsReceptors, Antigen, T-Cell

Identifiers

PMID1613457
PMCPMC2119303
OpenAlexW2048517129

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.