Evidence map›Paper›PMID 16133184›Full record

ArticleHuman genetics2005

Meprin beta metalloprotease gene polymorphisms associated with diabetic nephropathy in the Pima Indians.

Alexander R Red Eagle, Robert L Hanson, Weiping Jiang, Xiaoli Han, Gail L Matters, Giuseppina Imperatore, William C Knowler, Judith S Bond

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. To be there when the picture is being painted.The Journal of biological chemistry · 2020
    Article
  3. Article
  4. Article
  5. Article
  6. Proteases: History, discovery, and roles in health and disease.The Journal of biological chemistry · 2019
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Proteases: multifunctional enzymes in life and disease.The Journal of biological chemistry · 2008
    Review
  16. Diabetes and chronic kidney disease: lessons from the Pima Indians.Pediatric nephrology (Berlin, Germany) · 2008
    Review
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Alexander R Red EagleNational Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Phoenix, AZ, 85014, USA.
Robert L Hanson
Weiping Jiang
Xiaoli Han
Gail L Matters
Giuseppina Imperatore
William C Knowler
Judith S Bond
Penn State Milton S. Hershey Medical Center · USNational Institutes of Health · USNational Institute of Diabetes and Digestive and Kidney Diseases · USStanford University · US

Funding

MEPRINS-METALLOPROTEINSASES OF THE KIDNEY AND INTESTINER01DK019691 · NIDDK · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI BOND, JUDITH S · 1986 to 2010
$3.1M
Genetics Of Type 2 Diabetes MellitusZ01DK069028 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI KNOWLER, WILLIAM C · 1990 to 2008
$750k
Macrovascular and Other Complications Of Type 2 Diabetes MellitusZ01DK069036 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI KNOWLER, WILLIAM C · 1990 to 2008
$552k
CANDIDATE GENE FOR DIABETIC NEPHROPATHY--MEPRIN BETAR01DK054625 · NIDDK · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI BOND, JUDITH S · 1998 to 2002
$278k
MEPRINS - METALLOPROTEINASES OF THE KIDNEY AND INTESTINER56DK019691 · NIDDK · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI BOND, JUDITH S · 2005 to 2005
$73k
INTRACELLULAR PROTEIN CATABOLISM IN DIABETES MELLITUSR37DK019691 · NIDDK · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI BOND, JUDITH S · 1989 to 1996
–
Intramural NIH HHSNIDDK NIH HHS DK 19691NIDDK NIH HHS DK 54625
6 · The paper itself

Abstract

There is evidence that susceptibility to diabetic nephropathy has a significant genetic component. This investigation tested the hypothesis that variations in the structural or regulatory regions of the MEP1B gene are related to susceptibility to diabetic nephropathy in the Pima Indian population. The structure of the human MEP1B gene on chromosome 18 was determined by polymerase chain reaction (PCR) amplification. Samples from 154 diabetic individuals were analyzed for polymorphisms. These individuals belonged to 65 sibships with at least one sibling pair discordant for diabetic nephropathy. Approximately half of the individuals had diabetic nephropathy. Of the 154 samples, there were 91 discordant sibling pairs. Sequencing revealed 19 single nucleotide polymorphisms (SNPs) in the MEP1B gene. SNPs 1-5 were in the 5' region upstream of the start site for transcription; SNPs 6, 7, 9, 11-15, 17, and 19 were within introns; SNPs 8, 10, 16, and 18 were in exons 4, 9, 12, and 14. SNP 18 was the only one that results in an amino acid change (proline to leucine in the cytoplasmic tail). No overall associations were found for individual SNPs. Within-family association tests found significant results for SNPs 1, 3, 4, 5, 6, 9, 11, 18, and 19 such that the more common allele was more frequently observed in those with nephropathy than in their unaffected siblings. The present study demonstrates significant within-family association for SNPs in MEP1B gene with diabetic nephropathy. These results could be explained by functional effects of one or more of these SNPs or by linkage disequilibrium with a nearby functional locus.

Indexed as

Polymorphism, Single NucleotideDiabetes Mellitus, Type 2Diabetic NephropathiesDNA PrimersExonsGenetic LinkageHaplotypesHumansIndians, North AmericanIntronsMetalloendopeptidasesDNA Primersmeprin AMetalloendopeptidases

Identifiers

PMID16133184
OpenAlexW2057267774

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.