Evidence map›Paper›PMID 16129770›Full record

ArticleThe Journal of general physiology2005

Functional architecture of the inner pore of a voltage-gated Ca2+ channel.

Xiao-Guang Zhen, Cheng Xie, Aileen Fitzmaurice, Carl E Schoonover, Eleza T Orenstein, Jian Yang

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 44 citations in OpenAlex.

  1. CaChannels (Austin, Tex.) · 2020
    Review
  2. Article
  3. Store-Operated Calcium Channels.Physiological reviews · 2015
    Review
  4. Article
  5. Ion channel engineering: perspectives and strategies.Journal of molecular biology · 2015
    Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Multi-scale electrophysiology modeling: from atom to organ.The Journal of general physiology · 2010
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Origin of the voltage dependence of G-protein regulation of P/Q-type Ca2+ channels.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2008
    Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Xiao-Guang ZhenDepartment of Biological Sciences, Columbia University, New York, NY 10027, USA.
Cheng Xie
Aileen Fitzmaurice
Carl E Schoonover
Eleza T Orenstein
Jian Yang
Columbia University · US

Funding

Structural basis of TRPC channel function and regulationR01NS045383 · NINDS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI YANG, JIAN · 2002 to 2011
$3.2M
NINDS NIH HHS NS45383NINDS NIH HHS R01 NS045383
6 · The paper itself

Abstract

The inner pore of voltage-gated Ca2+ channels (VGCCs) is functionally important, but little is known about the architecture of this region. In K+ channels, this part of the pore is formed by the S6/M2 transmembrane segments from four symmetrically arranged subunits. The Ca2+ channel pore, however, is formed by four asymmetric domains of the same (alpha1) subunit. Here we investigated the architecture of the inner pore of P/Q-type Ca2+ channels using the substituted-cysteine accessibility method. Many positions in the S6 segments of all four repeats of the alpha1 subunit (Ca(v)2.1) were modified by internal methanethiosulfonate ethyltrimethylammonium (MTSET). However, the pattern of modification does not fit any known sequence alignment with K+ channels. In IIS6, five consecutive positions showed clear modification, suggesting a likely aqueous crevice and a loose packing between S6 and S5 segments, a notion further supported by the observation that some S5 positions were also accessible to internal MTSET. These results indicate that the inner pore of VGCCs is indeed formed by the S6 segments but is different from that of K+ channels. Interestingly some residues in IIIS6 and IVS6 whose mutations in L-type Ca2+ channels affect the binding of dihydropyridines and phenylalkylamines and are thought to face the pore appeared not to react with internal MTSET. Probing with qBBr, a rigid thiol-reactive agent with a dimension of 12 angstroms x 10 angstroms x 6 angstroms suggests that the inner pore can open to >10 angstroms. This work provides an impetus for future studies on ion permeation, gating, and drug binding of VGCCs.

Indexed as

Ion Channel GatingAmino Acid SequenceAnimalsBinding SitesCalcium ChannelsCalcium Channels, N-TypeCells, CulturedCloning, MolecularCysteineEthyl MethanesulfonateMembrane PotentialsMesylatesModels, MolecularMolecular Sequence DataOocytesPatch-Clamp Techniques(2-(trimethylammonium)ethyl)methanethiosulfonateCalcium ChannelsCalcium Channels, N-TypeCysteineEthyl MethanesulfonateMesylatesmethanethiosulfonate ethylammoniumSulfhydryl Reagents

Identifiers

PMID16129770
PMCPMC2266581
OpenAlexW2096208770

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.