Evidence map›Paper›PMID 16126837›Full record

ArticleThe Plant cell2005

The tomato Aux/IAA transcription factor IAA9 is involved in fruit development and leaf morphogenesis.

Hua Wang, Brian Jones, Zhengguo Li, Pierre Frasse, Corinne Delalande, Farid Regad, Salma Chaabouni, Alain Latché, Jean-Claude Pech, Mondher Bouzayen

Abstract read
In one paragraph

Article in The Plant cell, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 254 papers.

0numbers the graph read from it
0cells of the map it votes in
254citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

254 citing papers in PubMed.

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194 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Hua WangUnité Mixte de Recherche 990, Institut National de la Recherche Agronomique/Institut National Polytechnique-Ecole Nationale Supérieure Agronomique Toulouse, 31326 Castanet-Tolosan Cedex, France.
Brian Jones
Zhengguo Li
Pierre Frasse
Corinne Delalande
Farid Regad
Salma Chaabouni
Alain Latché
Jean-Claude Pech
Mondher Bouzayen

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Auxin/indole-3-acetic acid (Aux/IAA) proteins are transcriptional regulators that mediate many aspects of plant responses to auxin. While functions of most Aux/IAAs have been defined mainly by gain-of-function mutant alleles in Arabidopsis thaliana, phenotypes associated with loss-of-function mutations have been scarce and subtle. We report here that the downregulation of IAA9, a tomato (Solanum lycopersicum) gene from a distinct subfamily of Aux/IAA genes, results in a pleiotropic phenotype, consistent with its ubiquitous expression pattern. IAA9-inhibited lines have simple leaves instead of wild-type compound leaves, and fruit development is triggered before fertilization, giving rise to parthenocarpy. This indicates that IAA9 is a key mediator of leaf morphogenesis and fruit set. In addition, antisense plants displayed auxin-related growth alterations, including enhanced hypocotyl/stem elongation, increased leaf vascularization, and reduced apical dominance. Auxin dose-response assays revealed that IAA9 downregulated lines were hypersensitive to auxin, although the only early auxin-responsive gene that was found to be upregulated in the antisense lines was IAA3. The activity of the IAA3 promoter was stimulated in the IAA9 antisense genetic background, indicating that IAA9 acts in planta as a transcriptional repressor of auxin signaling. While no mutation in any member of subfamily IV has been reported to date, the phenotypes associated with the downregulation of IAA9 reveal distinct and novel roles for members of the Aux/IAA gene family.

Indexed as

Conserved SequenceDNA-Binding ProteinsDown-RegulationFruitGene Expression Regulation, PlantIndoleacetic AcidsMolecular Sequence DataPhenotypePhylogenyPlant Growth RegulatorsPlant LeavesPlant ProteinsPromoter Regions, GeneticSequence Homology, Amino AcidSignal TransductionSilencer Elements, TranscriptionalDNA-Binding ProteinsIndoleacetic AcidsPlant Growth RegulatorsPlant ProteinsTranscription Factors

Identifiers

PMID16126837
PMCPMC1242265

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.