Evidence map›Paper›PMID 16126349›Full record

ArticleGene2005

Characterization and expression analysis of the groESL operon of Bartonella bacilliformis.

Julie A Callison, James M Battisti, Kate N Sappington, Laura S Smitherman, Michael F Minnick

Abstract read
In one paragraph

Article in Gene, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Carrion's Disease: the Sound of Silence.Clinical microbiology reviews · 2018
    Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Julie A CallisonDivision of Biological Sciences, The University of Montana, Missoula, MT, 59812-4824, USA.
James M Battisti
Kate N Sappington
Laura S Smitherman
Michael F Minnick

Funding

Hemin Receptor Gene Family of Bartonella quintanaR01AI053111 · NIAID · UNIVERSITY OF MONTANA · PI MINNICK, MICHAEL F · 2003 to 2006
$1.1M
Bartonella Inhibitory Factor for Endothelial Cell GrowthR15AI052101 · NIAID · UNIVERSITY OF MONTANA · PI MINNICK, MICHAEL F · 2002 to 2002
$140k
NIAID NIH HHS AI053111NIAID NIH HHS AI52101NIAID NIH HHS R01 AI053111
6 · The paper itself

Abstract

The groESL operon of Bartonella bacilliformis, a facultative intracellular, Gram-negative bacterium and etiologic agent of Oroya Fever, was characterized. Sequence analysis revealed an operon containing two genes of 294 (groES) and 1632 nucleotides (groEL) separated by a 55-nt intergenic spacer. The operon is preceded by a 72-nt ORF (ORF1) that encodes a hypothetical protein with homology to a portion of the HrcA repressor for groESL. A divergent fumarate hydratase C (fumC) gene lies further upstream. Deduced amino acid sequences for B. bacilliformis GroEL and GroES revealed a high degree of identity with homologues from other Bartonella and alpha-Protebacteria. A single transcriptional start site (TSS) was mapped 79 nucleotides upstream of the groES start codon, regardless of incubation temperature. The TSS was located immediately 5' to a potential controlling inverted repeat of chaperonin expression (CIRCE) element and is preceded by a sigma70-like promoter. The operon is followed by a predicted rho-independent transcriptional terminator. Northern blot analysis indicated that groES and groEL are co-transcribed as a single mRNA of approximately 2.4 kb. A 6-h time course analysis by qRT-PCR showed that groEL expression increases 1.3-fold within 30 min of a temperature upshift from 30 to 37 degrees C, with maximum transcription reached after 60 min (approximately 4.3-fold), followed by a steady decrease to background (30 degrees C) transcription levels by 6 h. Western blot analysis revealed a 1.4- and 1.5-fold increase in GroEL synthesis following a temperature upshift or by inhibiting DNA supercoiling with coumermycin A1, respectively. Functional expression and complementation of temperature-sensitive Escherichia coli groES or groEL mutants with the cloned operon allowed them to grow at otherwise restrictive temperatures.

Indexed as

Gene Expression Regulation, BacterialAmino Acid SequenceBacterial ProteinsBartonella bacilliformisBase SequenceBlotting, NorthernBlotting, WesternChaperoninsDNA, BacterialEscherichia coliGenetic Complementation TestMolecular Sequence DataNucleic Acid ConformationOperonRegulatory Sequences, Nucleic AcidSequence AlignmentBacterial ProteinsChaperoninsDNA, BacterialGroESL protein, Bacteria

Identifiers

PMID16126349
PMCPMC1885459

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.