Evidence map›Paper›PMID 16118201›Full record

ArticleGenetics2005

Nuclear pore complex function in Saccharomyces cerevisiae is influenced by glycosylation of the transmembrane nucleoporin Pom152p.

Kenneth D Belanger, Amitabha Gupta, Kristy M MacDonald, Christina M Ott, Christine A Hodge, Charles M Cole, Laura I Davis

Open access · greenAbstract read
In one paragraph

Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Kenneth D BelangerDepartment of Biology, Colgate University, Hamilton, New York 13346, USA.
Amitabha Gupta
Kristy M MacDonald
Christina M Ott
Christine A Hodge
Charles M Cole
Laura I Davis
Colgate University · USDartmouth College · USBrandeis University · US

Funding

Influence of glycosylation on nuclear pore functionR15GM065107 · NIGMS · COLGATE UNIVERSITY · PI BELANGER, KENNETH D · 2001 to 2005
$331k
NIGMS NIH HHS GM-65107NIGMS NIH HHS R15 GM065107
6 · The paper itself

Abstract

The regulated transport of proteins across the nuclear envelope occurs through nuclear pore complexes (NPCs), which are composed of >30 different protein subunits termed nucleoporins. While some nucleoporins are glycosylated, little about the role of glycosylation in NPC activity is understood. We have identified loss-of-function alleles of ALG12, encoding a mannosyltransferase, as suppressors of a temperature-sensitive mutation in the gene encoding the FXFG-nucleoporin NUP1. We observe that nup1Delta cells import nucleophilic proteins more efficiently when ALG12 is absent, suggesting that glycosylation may influence nuclear transport. Conditional nup1 and nup82 mutations are partially suppressed by the glycosylation inhibitor tunicamycin, while nic96 and nup116 alleles are hypersensitive to tunicamycin treatment, further implicating glycosylation in NPC function. Because Pom152p is a glycosylated, transmembrane nucleoporin, we examined genetic interactions between pom152 mutants and nup1Delta. A nup1 deletion is lethal in combination with pom152Delta, as well as with truncations of the N-terminal and transmembrane regions of Pom152p. However, truncations of the N-glycosylated, lumenal domain of Pom152p and pom152 mutants lacking N-linked glycosylation sites are viable in combination with nup1Delta, suppress nup1Delta temperature sensitivity, and partially suppress the nuclear protein import defects associated with the deletion of NUP1. These data provide compelling evidence for a role for glycosylation in influencing NPC function.

Indexed as

Active Transport, Cell NucleusAmino Acid SequenceBase SequenceGlycosylationMannosyltransferasesMembrane GlycoproteinsMutationNuclear PoreNuclear Pore Complex ProteinsNuclear ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence DeletionTemperatureAlg12 protein, S cerevisiaeMannosyltransferasesMembrane GlycoproteinsNuclear Pore Complex ProteinsNuclear ProteinsNUP1 protein, S cerevisiaePOM152 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID16118201
PMCPMC1456851
OpenAlexW2116500649

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.