Evidence map›Paper›PMID 16116484›Full record

ArticleOncogene2005

Genomic instability in radiation-induced mouse lymphoma from p53 heterozygous mice.

Jiang-Hua Mao, Jiangzhen Li, Tao Jiang, Qian Li, Di Wu, Jesus Perez-Losada, Reyno DelRosario, Leif Peterson, Allan Balmain, Wei-Wen Cai

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. High Expression ofCancers · 2021
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Common fragile sites: genomic hotspots of DNA damage and carcinogenesis.International journal of molecular sciences · 2012
    Review
  11. Article
  12. Cis lethal genetic interactions attenuate and alter p53 tumorigenesis.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jiang-Hua MaoCancer Research Institute, University of California at San Francisco, San Francisco, CA 94143, USA.
Jiangzhen Li
Tao Jiang
Qian Li
Di Wu
Jesus Perez-Losada
Reyno DelRosario
Leif Peterson
Allan Balmain
Wei-Wen Cai
Baylor College of Medicine · USCancer Research Institute · USUniversity of California, San Francisco · US

Funding

Identification of epithelial tumor susceptiility genesU01CA084244 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BALMAIN, ALLAN · 1999 to 2013
$13.3M
NCI NIH HHS U01 CA84244
6 · The paper itself

Abstract

Although radiation can directly induce DNA damage and is a known human and animal carcinogen, the number of genetic changes in radiation-induced tumors, and the pathways responsible for generating them, are unknown. We have used high-density BAC arrays covering >95% of the mouse genome for analysis of genomic patterns of aberrations in spontaneous and radiation-induced mouse lymphomas. The majority of radiation-induced tumors exhibit one of three 'signatures' based on gene copy number changes. Some exhibit extensive scrambling of the genome, with very high numbers of recurrent gains and losses. Two other signatures are characterized by excess gains but relatively few losses, or vice versa. Changes in spontaneous tumors often involve whole chromosomes, whereas radiation-induced tumors exhibit a high frequency of localized deletion/amplification events. The number of copy number abnormalities does not correlate with the latency or pathology of the tumors. We propose that specific early events following radiation exposure induce changes in 'caretaker' genes that control specific downstream pathways involved in DNA damage repair. The nature of these early events may determine the overall genomic signature observed in the resulting tumor.

Indexed as

Genes, p53AnimalsDNA DamageDNA RepairFemaleGene AmplificationGene DeletionGene Expression ProfilingGenomic InstabilityLymphomaMaleMiceMice, Inbred C57BLNeoplasms, Radiation-InducedThymus Neoplasms

Identifiers

PMID16116484
OpenAlexW1976816889

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.