Evidence map›Paper›PMID 16113110›Full record

ArticleBiophysical journal2005

Probing vesicle dynamics in single hippocampal synapses.

Matthew Shtrahman, Chuck Yeung, David W Nauen, Guo-qiang Bi, Xiao-Lun Wu

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Activity-Dependence of Synaptic Vesicle Dynamics.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Calcium, calpain, and calcineurin in low-frequency depression of transmitter release.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2013
    Article
  20. Synaptic vesicle pools and dynamics.Cold Spring Harbor perspectives in biology · 2012
    Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Matthew ShtrahmanDepartment of Physics and Astronomy, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Chuck Yeung
David W Nauen
Guo-qiang Bi
Xiao-Lun Wu
University of Pittsburgh · USPennsylvania State University · US

Funding

Spatio-Temporal Specificity of Synaptic PlasticityR01MH066962 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BI, GUOQIANG · 2003 to 2007
$1.3M
NIMH NIH HHS R01 MH 066962NIMH NIH HHS R01 MH066962
6 · The paper itself

Abstract

We use fluorescence correlation spectroscopy and fluorescence recovery after photobleaching to study vesicle dynamics inside the synapses of cultured hippocampal neurons labeled with the fluorescent vesicle marker FM 1-43. These studies show that when the cell is electrically at rest, only a small population of vesicles is mobile, taking seconds to traverse the synapse. Applying the phosphatase inhibitor okadaic acid causes vesicles to diffuse freely, moving 30 times faster than vesicles in control synapses. These results suggest that vesicles move sluggishly due to binding to elements of the synaptic cytomatrix and that this binding is altered by phosphorylation. Motivated by these results, a model is constructed consisting of diffusing vesicles that bind reversibly to the cytomatrix. This stick-and-diffuse model accounts for the fluorescence correlation spectroscopy and fluorescence recovery after photobleaching data, and also predicts the well-known exponential refilling of the readily releasable pool. Our measurements suggest that the movement of vesicles to the active zone is the rate-limiting step in this process.

Indexed as

AnimalsBiophysicsCells, CulturedDiffusionEnzyme InhibitorsExocytosisFluorescence Recovery After PhotobleachingHippocampusModels, BiologicalModels, StatisticalNeuronsOkadaic AcidPhosphoric Monoester HydrolasesPhosphorylationRatsSpectrometry, FluorescenceEnzyme InhibitorsOkadaic AcidPhosphoric Monoester Hydrolases

Identifiers

PMID16113110
PMCPMC1366854
OpenAlexW2025366201

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.