Evidence map›Paper›PMID 16103352›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Cyclophilin D is a component of mitochondrial permeability transition and mediates neuronal cell death after focal cerebral ischemia.

Anna C Schinzel, Osamu Takeuchi, Zhihong Huang, Jill K Fisher, Zhipeng Zhou, Jeffery Rubens, Claudio Hetz, Nika N Danial, Michael A Moskowitz, Stanley J Korsmeyer

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 418 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
418citing papers in PubMed, 1 pooled it
15.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

418 citing papers in PubMed, 1 synthesis or guideline pooled it, 804 citations in OpenAlex.

  1. Pooled it
  2. Review
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  5. Mitochondria-ER crosstalk via MAMS: Bridging cellular homeostasis and cancer progression.Apoptosis : an international journal on programmed cell death · 2026
    Review
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  9. Mitochondria dysfunction, a potential cytoprotection target against ischemia-reperfusion injury in a mouse stroke model.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2025
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358 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Anna C SchinzelHoward Hughes Medical Institute and Dana-Farber Cancer Institute, Harvard Medical School, 44 Binney Street, Boston, MA 02115, USA. anna.schinzel@dfci.harvard.edu
Osamu Takeuchi
Zhihong Huang
Jill K Fisher
Zhipeng Zhou
Jeffery Rubens
Claudio Hetz
Nika N Danial
Michael A Moskowitz
Stanley J Korsmeyer
Harvard University · USHoward Hughes Medical Institute · USOsaka University · JPDana-Farber Cancer Institute · USMassachusetts General Hospital · US

Funding

TRIGEMINOVASCULAR CONTROL OF CEREBRAL BLOOD VESSELSP50NS010828 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI LO, ENG H. · 1985 to 2007
$10.8M
YAC TECHNOLOGY IN THE REGULATION OF A LARGE GENE, BCL2R01CA050239 · NCI · WASHINGTON UNIVERSITY · PI WALENSKY, LOREN DAVID · 1989 to 2014
$4.3M
Caspase Mechanisms after Brain InjuryR01NS037141 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI MOSKOWITZ, MICHAEL A. · 1998 to 2006
$2.6M
Protein Interaction Extends the Cell Death PathwayR37CA050239 · NCI · DANA-FARBER CANCER INSTITUTE · PI KORSMEYER, STANLEY J · 2002 to 2004
$1.8M
Role of protein kinase Akt in cerebral ischemiaP01NS010828 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI MOSKOWITZ, MICHAEL A. · 1989 to 2008
$1.4M
INACTIVATION OF DELAYED RECTIFIER POTASSIUM CHANNELSF32NS010828 · NINDS · UNIVERSITY OF FLORIDA · PI FRAZIER, CHARLES J · 1999 to 2001
$80k
NCI NIH HHS CA 50239NCI NIH HHS R01 CA050239NCI NIH HHS R37 CA050239NINDS NIH HHS F32 NS010828NINDS NIH HHS NS 10828NINDS NIH HHS NS 37141NINDS NIH HHS P01 NS010828NINDS NIH HHS P50 NS010828NINDS NIH HHS R01 NS037141
6 · The paper itself

Abstract

Mitochondrial permeability transition (PT) is a phenomenon induced by high levels of matrix calcium and is characterized by the opening of the PT pore (PTP). Activation of the PTP results in loss of mitochondrial membrane potential, expansion of the matrix, and rupture of the mitochondrial outer membrane. Consequently, PT has been implicated in both apoptotic and necrotic cell death. Cyclophilin D (CypD) appears to be a critical component of the PTP. To investigate the role of CypD in cell death, we created a CypD-deficient mouse. In vitro, CypD-deficient mitochondria showed an increased capacity to retain calcium and were no longer susceptible to PT induced by the addition of calcium. CypD-deficient primary mouse embryonic fibroblasts (MEFs) were as susceptible to classical apoptotic stimuli as the WT, suggesting that CypD is not a central component of cell death in response to these specific death stimuli. However, CypD-deficient MEFs were significantly less susceptible than their WT counterparts to cell death induced by hydrogen peroxide, implicating CypD in oxidative stress-induced cell death. Importantly, CypD-deficient mice displayed a dramatic reduction in brain infarct size after acute middle cerebral artery occlusion and reperfusion, strongly supporting an essential role for CypD in an ischemic injury model in which calcium overload and oxidative stress have been implicated.

Indexed as

AnimalsApoptosisBrain IschemiaCalciumCyclophilinsHydrogen PeroxideIntracellular MembranesMiceMice, TransgenicMicroscopy, Electron, TransmissionMitochondriaMitochondrial SwellingNeuronsPeptidyl-Prolyl Isomerase FPermeabilitySpectrophotometryCalciumCyclophilinsHydrogen PeroxidePeptidyl-Prolyl Isomerase FPPIF protein, mouseVoltage-Dependent Anion Channels

Identifiers

PMID16103352
PMCPMC1189333
OpenAlexW2088629175

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.