Evidence map›Paper›PMID 16103276›Full record

ArticleThe Journal of general physiology2005

Investigating the putative glycine hinge in Shaker potassium channel.

Shinghua Ding, Lindsey Ingleby, Christopher A Ahern, Richard Horn

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 85 citations in OpenAlex.

  1. Article
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  8. Calcium channel gating.Pflugers Archiv : European journal of physiology · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Shinghua DingDepartment of Physiology, Institute of Hyperexcitability, Jefferson Medical College, Philadelphia, PA 19107, USA.
Lindsey Ingleby
Christopher A Ahern
Richard Horn
Jefferson Institute · US

Funding

Molecular Physiology of Voltage gated Ion ChannelsR01AR041691 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI HORN, RICHARD J · 1992 to 2005
$2.1M
NIAMS NIH HHS R01 AR041691NIAMS NIH HHS R01 AR41691
6 · The paper itself

Abstract

The crystal structure of an open potassium channel reveals a kink in the inner helix that lines the pore (Jiang, Y.X., A. Lee, J.Y. Chen, M. Cadene, B.T. Chait, and R. MacKinnon. 2002. Nature 417:523-526). The putative hinge point is a highly conserved glycine residue. We examined the role of the homologous residue (Gly466) in the S6 transmembrane segment of Shaker potassium channels. The nonfunctional alanine mutant G466A will assemble, albeit poorly, with wild-type (WT) subunits, suppressing functional expression. To test if this glycine residue is critical for activation gating, we did a glycine scan along the S6 segment in the background of G466A. Although all of these double mutants lack the higher-level glycosylation that is characteristic of mature Shaker channels, one (G466A/V467G) is able to generate voltage-dependent potassium current. Surface biotinylation shows that functional and nonfunctional constructs containing G466A express at comparable levels in the plasma membrane. Compared with WT channels, the shifted-glycine mutant has impairments in voltage-dependent channel opening, including a right-shifted activation curve and a decreased rate of activation. The double mutant has relatively normal open-channel properties, except for a decreased affinity for intracellular blockers, a consequence of the loss of the side chain of Val467. Control experiments with the double mutants M440A/G466A and G466A/V467A suggest that the flexibility provided by Gly466 is more important for channel function than its small size. Our results support roles for Gly466 both in biogenesis of the channel and as a hinge in activation gating.

Indexed as

Ion Channel GatingAnimalsBinding SitesCell LineEpitopesGlycineGlycosylationHumansMembrane PotentialsMutationOligopeptidesOocytesPeptidesPoint MutationPotassiumPotassium Channel BlockersEpitopesFLAG peptideGlycineOligopeptidesPeptidesPotassiumPotassium Channel BlockersPotassium ChannelsQuaternary Ammonium CompoundsShaker Superfamily of Potassium Channelstetrapentylammonium

Identifiers

PMID16103276
PMCPMC2266578
OpenAlexW2112592411

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.