Evidence map›Paper›PMID 16103153›Full record

ArticleJournal of virology2005

Characterization of an antisense transcript spanning the UL81-82 locus of human cytomegalovirus.

Mariana Bego, J Maciejewski, S Khaiboullina, G Pari, S St Jeor

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Journal of virology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00006314 (Cytomegalovirus Spread and Reactivation in Blood Cells), which is not on this map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00006314 completednot on this map

Cytomegalovirus Spread and Reactivation in Blood Cells

TypeobservationalSponsorNational Heart, Lung, and Blood Institute (NHLBI)Ran1999 to 2004ConditionsBlood Disease, Cytomegalovirus Infections
3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 117 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Trial
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Insight for Immunotherapy of HCMV Infection.International journal of biological sciences · 2021
    Review
  11. Review
  12. Review
  13. Herpesviral Latency-Common Themes.Pathogens (Basel, Switzerland) · 2020
    Review
  14. Review
  15. Review
  16. Expanding the Known Functional Repertoire of the Human Cytomegalovirus pp71 Protein.Frontiers in cellular and infection microbiology · 2020
    Review
  17. Review
  18. Article
  19. Article
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Mariana BegoDepartment of Microbiology, University of Nevada, Reno, 89557, USA.
J Maciejewski
S Khaiboullina
G Pari
S St Jeor
University of Nevada, Reno · USCleveland Clinic · US

Funding

CYTOMEGALOVIRUS SPREAD AND REACTIVATION IN BLOOD CELLSR01HL063470 · NHLBI · UNIVERSITY OF NEVADA RENO · PI ST. JEOR, STEPHEN CHARLES · 1999 to 2002
$709k
NHLBI NIH HHS HL63470NHLBI NIH HHS R01 HL063470
6 · The paper itself

Abstract

In this study we present the characterization of a novel transcript, UL81-82ast, UL81-82 antisense transcript, and its protein product. The transcript was initially found in a cDNA library of monocytes from a seropositive donor. mRNA was obtained from monocytes isolated from a healthy donor with a high antibody titer against human cytomegalovirus (HCMV). The mRNAs were cloned into a lambda phage-derived vector to create the cDNA library. Using PCR, UL81-82ast was amplified from the library. The library was tested for the presence of numerous HCMV genes. Neither structural genes nor immediate-early genes were found. UL81-82ast was detected in five bone marrow samples from healthy antibody-positive donors. This same transcript was also found in in vitro-infected human fibroblasts early after infection but disappears at the same time that UL82 transcription begins. Not only was the transcript amplified using reverse transcription-PCR and sequenced but its protein product (UL82as protein) was detected by both Western blot and immunofluorescence. Phylogenetic studies using UL82as protein were conducted, showing a high degree of conservation in clinical isolates, laboratory strains of HCMV, and even in chimpanzee CMV. The transcript could be involved in the posttranscriptional regulation of the UL82 gene, affecting its mRNA stability or translation. Since the UL82 product, pp71, functions as an immediate-early transactivator, its posttranscriptional control could have some effect over latency reactivation and lytic replication.

Indexed as

Amino Acid SequenceAntisense Elements (Genetics)Bone MarrowCytomegalovirusCytomegalovirus InfectionsFibroblastsHumansMolecular Sequence DataRNA, MessengerRNA, ViralSequence AlignmentTranscription, GeneticViral ProteinsAntisense Elements (Genetics)cytomegalovirus phosphoprotein 71kDaRNA, MessengerRNA, ViralViral Proteins

Identifiers

PMID16103153
PMCPMC1193633
OpenAlexW2019369000

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.