Evidence map›Paper›PMID 16102314›Full record

ArticleEmerging infectious diseases2005

Spoligotyping and Mycobacterium tuberculosis.

Andrea Gori, Alessandra Bandera, Giulia Marchetti, Anna Degli Esposti, Lidia Catozzi, Gian Piero Nardi, Lidia Gazzola, Giulio Ferrario, Jan D A van Embden, Dick van Soolingen and 2 more

Open access · diamondAbstract readComparative Study
In one paragraph

Article in Emerging infectious diseases, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
  2. Emergence ofFrontiers in public health · 2025
    Review
  3. Article
  4. Deep clustering of bacterial tree images.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Spoligotype Variation ofThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2020
    Article
  12. Article
  13. Diversity ofBioMed research international · 2018
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Andrea GoriInstitute of Infectious Diseases, L. Sacco Hospital, University of Milan, Milan, Italy. andrea.gori@unimi.it
Alessandra Bandera
Giulia Marchetti
Anna Degli Esposti
Lidia Catozzi
Gian Piero Nardi
Lidia Gazzola
Giulio Ferrario
Jan D A van Embden
Dick van Soolingen
Mauro Moroni
Fabio Franzetti
University of Milan · ITNational Institute for Public Health and the Environment · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We evaluated the clinical usefulness of spoligotyping, a polymerase chain reaction-based method for simultaneous detection and typing of Mycobacterium tuberculosis strains, with acid-fast bacilli-positive slides from clinical specimens or mycobacterial cultures. Overall sensitivity and specificity were 97% and 95% for the detection of M. tuberculosis and 98% and 96% when used with clinical specimens. Laboratory turnaround time of spoligotyping was less than that for culture identification by a median of 20 days. In comparison with IS6110-based restriction fragment length polymorphism typing, spoligotyping overestimated the number of isolates with identical DNA fingerprints by approximately 50%, but showed a 100% negative predictive value. Spoligotyping resulted in the modification of ongoing antimycobacterial treatment in 40 cases and appropriate therapy in the absence of cultures in 11 cases. The rapidity of this method in detection and typing could make it useful in the management of tuberculosis in a clinical setting.

Indexed as

AdolescentAdultAgedAged, 80 and overChildChild, PreschoolDNA, BacterialDNA Transposable ElementsFemaleHumansImage Processing, Computer-AssistedMaleMiddle AgedMycobacterium tuberculosisPolymerase Chain ReactionPolymorphism, Restriction Fragment LengthDNA, BacterialDNA Transposable Elements

Identifiers

PMID16102314
PMCPMC3320497
OpenAlexW2068181475

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.