Evidence map›Paper›PMID 16100278›Full record

ArticleBiophysical journal2005

Multiple-bond kinetics from single-molecule pulling experiments: evidence for multiple NCAM bonds.

E J Hukkanen, J A Wieland, A Gewirth, D E Leckband, R D Braatz

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

E J HukkanenDepartment of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana-Champaign, IL, USA.
J A Wieland
A Gewirth
D E Leckband
R D Braatz
University of Illinois Urbana-Champaign · US

Funding

Force Probe Investigations of NCAM AdhesionR01GM063536 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI LECKBAND, DEBORAH E · 2001 to 2004
$1.1M
NIGMS NIH HHS R01 GM063536NIGMS NIH HHS R01 GM 63536
6 · The paper itself

Abstract

The kinetic parameters of single bonds between neural cell adhesion molecules were determined from atomic force microscope measurements of the forced dissociation of the homophilic protein-protein bonds. The analytical approach described provides a systematic procedure for obtaining rupture kinetics for single protein bonds from bond breakage frequency distributions obtained from single-molecule pulling experiments. For these studies, we used the neural cell adhesion molecule (NCAM), which was recently shown to form two independent protein bonds. The analysis of the bond rupture data at different loading rates, using the single-bond full microscopic model, indicates that the breakage frequency distribution is most sensitive to the distance to the transition state and least sensitive to the molecular spring constant. The analysis of bond failure data, however, motivates the use of a double-bond microscopic model that requires an additional kinetic parameter. This double-bond microscopic model assumes two independent NCAM-NCAM bonds, and more accurately describes the breakage frequency distribution, particularly at high loading rates. This finding agrees with recent surface-force measurements, which showed that NCAM forms two spatially distinct bonds between opposed proteins.

Indexed as

AnimalsBiophysicsCHO CellsComputer SimulationCricetinaeKineticsLikelihood FunctionsMicroscopy, Atomic ForceModels, ChemicalModels, StatisticalModels, TheoreticalNeural Cell Adhesion MoleculesPolyethylene GlycolsPressureProtein BindingSoftwareNeural Cell Adhesion MoleculesPolyethylene Glycols

Identifiers

PMID16100278
PMCPMC1366839
OpenAlexW2052118418

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.