Evidence map›Paper›PMID 16100263›Full record

ArticleBiophysical journal2005

Mimicry of a host anion channel by a Helicobacter pylori pore-forming toxin.

Daniel M Czajkowsky, Hideki Iwamoto, Gabor Szabo, Timothy L Cover, Zhifeng Shao

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
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  3. Review
  4. Article
  5. Review
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  7. Review
  8. Ion channels in microbes.Physiological reviews · 2008
    Review
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Daniel M CzajkowskyDepartment of Molecular Physiology and Biological Physics, University of Virginia Health Sciences Center, Charlottesville, VA 22908, USA.
Hideki Iwamoto
Gabor Szabo
Timothy L Cover
Zhifeng Shao
University of Virginia · USVanderbilt University · US

Funding

Structure-function analysis of H. pylori VacAR01AI039657 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI TIMOTHY L COVER · 1996 to 2026
$8.3M
Single Molecule Studies of Replication Origin in MetazoaR01GM068729 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI SHAO, ZHIFENG · 2004 to 2007
$957k
MOLECULAR INTERACTIONS IN G PROTEIN COUPLED SIGNALINGR01GM062762 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI SZABO, GABOR · 2001 to 2004
$933k
Low Temperature AFM/Freeze Fracture &EtchR01EB002017 · NIBIB · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI SHAO, ZHIFENG · 2003 to 2003
$259k
NIAID NIH HHS AI 39657NIAID NIH HHS R01 AI039657NIBIB NIH HHS EB 002017NIBIB NIH HHS R01 EB002017NIGMS NIH HHS GM 62762NIGMS NIH HHS GM 68729NIGMS NIH HHS R01 GM062762NIGMS NIH HHS R01 GM068729
6 · The paper itself

Abstract

Bacterial pore-forming toxins have traditionally been thought to function either by causing an essentially unrestricted flux of ions and molecules across a membrane or by effecting the transmembrane transport of an enzymatically active bacterial peptide. However, the Helicobacter pylori pore-forming toxin, VacA, does not appear to function by either of these mechanisms, even though at least some of its effects in cells are dependent on its pore-forming ability. Here we show that the VacA channel exhibits two of the most characteristic electrophysiological properties of a specific family of cellular channels, the ClC channels: an open probability dependent on the molar ratio of permeable ions and single channel events resolvable as two independent, voltage-dependent transitions. The sharing of such peculiar properties by VacA and host ClC channels, together with their similar magnitudes of conductance, ion selectivities, and localization within eukaryotic cells, suggests a novel mechanism of toxin action in which the VacA pore largely mimics the electrophysiological behavior of a host channel, differing only in the membrane potential at which it closes. As a result, VacA can perturb, but not necessarily abolish, the homeostatic ionic imbalance across a membrane and so change cellular physiology without necessarily jeopardizing vitality.

Indexed as

AnionsBacterial ProteinsBacterial ToxinsBiological TransportBiophysical PhenomenaBiophysicsBromidesCalciumCell Membrane PermeabilityElectrophysiologyHelicobacter pyloriIon ChannelsIonsLipid BilayersPeptidesSodium CompoundsAnionsBacterial ProteinsBacterial ToxinsBromidesCalciumIon ChannelsIonsLipid BilayersPeptidessodium bromideSodium CompoundsToxins, BiologicalVacA protein, Helicobacter pylori

Identifiers

PMID16100263
PMCPMC1366806
OpenAlexW2084721414

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.