Evidence map›Paper›PMID 16093345›Full record

ArticleMolecular biology of the cell2005

ODA16p, a Chlamydomonas flagellar protein needed for dynein assembly.

Noveera T Ahmed, David R Mitchell

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Frontiers in cell and developmental biology · 2024
    Review
  6. microPublication biology · 2024
    Article
  7. International journal of molecular sciences · 2023
    Review
  8. Review
  9. Article
  10. Biallelic DAW1 variants cause a motile ciliopathy characterized by laterality defects and subtle ciliary beating abnormalities.Genetics in medicine : official journal of the American College of Medical Genetics · 2022
    Article
  11. Article
  12. PCD Genes-From Patients to Model Organisms and Back to Humans.International journal of molecular sciences · 2022
    Review
  13. eLife · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Asymmetries in the cilia ofPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Noveera T AhmedDepartment of Cell and Developmental Biology, State University of New York Upstate Medical University, Syracuse, NY 13210, USA.
David R Mitchell
SUNY Upstate Medical University · US

Funding

MOLECULAR AND GENETIC ANALYSIS OF FLAGELLAR DYNEINSR01GM044228 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI MITCHELL, DAVID R · 1990 to 2013
$3.6M
NIGMS NIH HHS GM044228NIGMS NIH HHS R01 GM044228
6 · The paper itself

Abstract

Dynein motors of cilia and flagella function in the context of the axoneme, a very large network of microtubules and associated proteins. To understand how dyneins assemble and attach to this network, we characterized two Chlamydomonas outer arm dynein assembly (oda) mutants at a new locus, ODA16. Both oda16 mutants display a reduced beat frequency and altered swimming behavior, similar to previously characterized oda mutants, but only a partial loss of axonemal dyneins as shown by both electron microscopy and immunoblots. Motility studies suggest that the remaining outer arm dyneins on oda16 axonemes are functional. The ODA16 locus encodes a 49-kDa WD-repeat domain protein. Homologues were found in mammalian and fly databases, but not in yeast or nematode databases, implying that this protein is only needed in organisms with motile cilia or flagella. The Chlamydomonas ODA16 protein shares 62% identity with its human homologue. Western blot analysis localizes more than 90% of ODA16p to the flagellar matrix. Because wild-type axonemes retain little ODA16p but can be reactivated to a normal beat in vitro, we hypothesize that ODA16p is not an essential dynein subunit, but a protein necessary for dynein transport into the flagellar compartment or assembly onto the axoneme.

Indexed as

Algal ProteinsAmino Acid SequenceAnimalsChlamydomonasCloning, MolecularConserved SequenceDyneinsFlagellaMicroscopy, Electron, TransmissionMicrotubule ProteinsMicrotubulesMolecular Sequence DataMutationSequence Homology, Amino AcidAlgal ProteinsDyneinsMicrotubule Proteins

Identifiers

PMID16093345
PMCPMC1237099
OpenAlexW2109822773

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.