Evidence map›Paper›PMID 16090358›Full record

ArticlePhysical review letters2005

Canalizing Kauffman networks: nonergodicity and its effect on their critical behavior.

André Auto Moreira, Luís A Nunes Amaral

Abstract read
In one paragraph

Article in Physical review letters, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Robustness, canalyzing functions and systems design.Theory in biosciences = Theorie in den Biowissenschaften · 2014
    Article
  7. Article
  8. Boolean modeling of collective effects in complex networks.Physical review. E, Statistical, nonlinear, and soft matter physics · 2009
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

André Auto MoreiraDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois 60208, USA. auto@northwestern.edu
Luís A Nunes Amaral

Funding

Integrative Approach to Characterizing Gene RegulationK25GM069546 · NIGMS · NORTHWESTERN UNIVERSITY · PI AMARAL, LUIS A. NUNES · 2004 to 2008
$786k
NIGMS NIH HHS K25 GM069546
6 · The paper itself

Abstract

Boolean networks have been used to study numerous phenomena, including gene regulation, neural networks, social interactions, and biological evolution. Here, we propose a general method for determining the critical behavior of Boolean systems built from arbitrary ensembles of Boolean functions. In particular, we solve the critical condition for systems of units operating according to canalizing functions and present strong numerical evidence that our approach correctly predicts the phase transition from order to chaos in such systems.

Indexed as

BiophysicsComputer SimulationModels, BiologicalModels, GeneticModels, TheoreticalNonlinear DynamicsSoftwareSystems Biology

Identifiers

PMID16090358
PMCPMC2128748

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.