Evidence map›Paper›PMID 16086186›Full record

ArticleNeurogenetics2005

Differential expression of splice variant and wild-type parkin in sporadic Parkinson's disease.

E K Tan, H Shen, J M M Tan, K L Lim, S Fook-Chong, W P Hu, M C Paterson, V R Chandran, K Yew, C Tan and 5 more

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Article in Neurogenetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Expression pattern of parkin isoforms in lung adenocarcinomas.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2015
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Neuronal gene expression correlates of Parkinson's disease with dementia.Movement disorders : official journal of the Movement Disorder Society · 2008
    Article
  14. Review
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

E K TanDepartment of Neurology, Singapore General Hospital, Outram Road, Singapore, 169608, Singapore. gnrtek@sgh.com.sg
H Shen
J M M Tan
K L Lim
S Fook-Chong
W P Hu
M C Paterson
V R Chandran
K Yew
C Tan
Y Yuen
R Pavanni
M C Wong
K Puvan
Y Zhao

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAltered splicing of parkin under cellular stress could lead to changes in gene expression and altered protein activity. The causative role of parkin in sporadic Parkinson's disease (PD) is unknown.

objectivesWe described a parkin splice variant (SV) in the substantia nigra and leukocytes of sporadic PD patients. Using a case control methodology, we investigated the exon 4 SV (E4SV) and wild-type parkin expression in the leukocytes of sporadic PD patients and healthy individuals. METHODS/

resultsWe identified a parkin E4SV in the substantia nigra and leukocytes of sporadic PD patients and controls by reverse transcriptase-polymerase chain reaction (PCR). The exon 4 (122 bp) deletion resulted in a reading frame shift over the junction of exons 3-5 and a stop codon (tga) 17 bp downstream from exon 3. The translated truncated protein was associated with a total loss of the two-RING finger functional domain. Utilizing TaqMan real-time PCR with probes located across the junction of exons 3-4 or 3-5, we demonstrated an over-expression of E4SV/wild-type parkin ratio in the leukocytes of sporadic PD patients compared to age-, gender-, and race-matched controls (p<0.0005). A multivariate regression analysis demonstrated that the ratio of E4SV/wild-type parkin expression increased with age in PD patients, but this was not observed in the controls (p<0.0005).

conclusionThe relative expression of E4SV/wild type parkin was increased in sporadic PD compared to healthy controls. Based on our observations, further functional studies to determine the pathophysiologic role of E4SV in sporadic PD patients will be of importance.

Indexed as

Alternative SplicingAgedBase SequenceDNA PrimersFemaleGene DosageHumansLeukocytesMaleMiddle AgedMolecular Sequence DataParkinson DiseaseSubstantia NigraUbiquitin-Protein LigasesDNA Primersparkin proteinUbiquitin-Protein Ligases

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.