Evidence map›Paper›PMID 16081959›Full record

ArticleJournal of clinical microbiology2005

Simultaneous detection of four human pathogenic microsporidian species from clinical samples by oligonucleotide microarray.

Zheng Wang, Palmer A Orlandi, David A Stenger

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. A Fatal Case of Disseminated Microsporidiosis Due toOpen forum infectious diseases · 2019
    Article
  5. Article
  6. Article
  7. Article
  8. Extraintestinal microsporidiosis.Journal of clinical microbiology · 2014
    Review
  9. Review
  10. Review
  11. Article
  12. Molecular diagnostic tests for microsporidia.Interdisciplinary perspectives on infectious diseases · 2009
    Article
  13. Article
  14. Article
  15. Microsporidiosis: current status.Current opinion in infectious diseases · 2006
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Zheng WangCenter for Bio/Molecular Science and Engineering, Code 6910, Naval Research Laboratory, 4555 Overlook Avenue SW, Washington, DC 20375, USA. zwang@cbmse.nrl.navy.mil
Palmer A Orlandi
David A Stenger
United States Naval Research Laboratory · USCenter for Food Safety and Applied Nutrition · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microsporidian species have been rapidly emerging as human enteric pathogens in immunocompromised and immunocompetent individuals in recent years. Routine diagnostic techniques for microsporidia in clinical laboratories are laborious and insensitive and tend to underestimate their presence. In most instances, they are unable to differentiate species of spores due to their small sizes and similar morphologies. In this study, we report the development of another protozoan oligonucleotide microarray assay for the simultaneous detection and identification to the species level of four major microsporidian species: Enterocytozoon bieneusi, Encephalitozoon cuniculi, Encephalitozoon hellem, and Encephalitozoon intestinalis. The 18S small-subunit rRNA gene was chosen as the amplification target, labeled with fluorescence dye, and hybridized to a series of species-specific oligonucleotide probes immobilized on a microchip. The specificity and sensitivity of the microarray were clearly demonstrated by the unique hybridization profiles exhibited by each species of microsporidian tested and its ability to detect as few as 10 spores. In order to assess the applicability of this microarray in a clinical setting, we conducted microarray assays of 20 fecal samples from AIDS patients. Twelve of these samples were positive for the presence of microsporidia and could be confidently identified; 11 of them were positive for more than one species. Our results suggested that this microarray-based approach represents an attractive diagnostic tool for high-throughput detection and identification of microsporidian species in clinical and epidemiological investigations.

Indexed as

Acquired Immunodeficiency SyndromeAnimalsEncephalitozoonEncephalitozoon cuniculiEnterocytozoonHumansMicrosporidiaOligonucleotide Array Sequence AnalysisOligonucleotide ProbesPolymerase Chain ReactionSensitivity and SpecificityOligonucleotide Probes

Identifiers

PMID16081959
PMCPMC1233985
OpenAlexW2130842925

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.