Evidence map›Paper›PMID 16081801›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2005

Changes in replication, nuclear location, and expression of the Igh locus after fusion of a pre-B cell line with a T cell line.

Jie Zhou, Shireen Saleque, Olga Ermakova, Manuel A Sepulveda, Qiaoxin Yang, Laurel A Eckhardt, Carl L Schildkraut, Barbara K Birshtein

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jie ZhouDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Shireen Saleque
Olga Ermakova
Manuel A Sepulveda
Qiaoxin Yang
Laurel A Eckhardt
Carl L Schildkraut
Barbara K Birshtein
Albert Einstein College of Medicine · USCity University of New York · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI THOMAS E ROHAN · 1985 to 2026
$111.2M
DNA REPLICATION INITIATION SITES IN MAMMALIAN CELLSR01GM045751 · NIGMS · YESHIVA UNIVERSITY · PI SCHILDKRAUT, CARL L · 1992 to 2023
$13.4M
CELLULAR AND STRUCTURAL STUDIES OF MYELOMA MUTANTSR01AI013509 · NIAID · YESHIVA UNIVERSITY · PI BIRSHTEIN, BARBARA · 1985 to 2009
$2.9M
NEGATIVE REGULATION OF IMMUNOGLOBULIN GENESR01CA062363 · NCI · HUNTER COLLEGE · PI ECKHARDT, LAUREL A · 1994 to 1997
–
CELLULAR AND STRUCTURAL STUDIES OF MYELOMA MUTANTSR37AI013509 · NIAID · YESHIVA UNIVERSITY · PI BIRSHTEIN, BARBARA · 1989 to 1998
–
NCI NIH HHS P30 CA013330NCI NIH HHS P30CA13330NCI NIH HHS R01 CA062363NCI NIH HHS R01 CA-62363NIAID NIH HHS R01 AI013509NIAID NIH HHS R01 AI13509NIAID NIH HHS R37 AI013509NIGMS NIH HHS R01 GM045751NIGMS NIH HHS R01 GM45751
6 · The paper itself

Abstract

We have previously observed that replication and nuclear location of the murine Igh locus are developmentally regulated during B cell differentiation. In non-B, B, and plasma cells, sequences near the 3' end of the Igh locus replicate early in S while upstream Vh sequences replicate late in S, and the Igh locus is located near the nuclear periphery. In fact, in MEL non-B cells, replication of a 500-kb segment containing Igh-C and flanking sequences occurs progressively later throughout S by 3' to 5' unidirectional fork movement. In contrast, in pro- and pre-B cells, the entire 3-Mb Igh locus is located away from the nuclear periphery and replicates early in S by forks progressing in both directions. In this study, using an 18-81 (pre-B) x BW5147 (T) cell fusion system in which Igh expression is extinguished, we found that in all Igh alleles, Vh sequences replicated later in S than 3' Igh sequences (similar to that detected in BW5147), but the Igh locus was situated away from the nuclear periphery (similar to that observed in 18-81). Thus, pre-B cell-derived Igh genes had changes in replication timing, but not in nuclear location, whereas T cell-derived Igh genes changed their nuclear location but not their replication timing. These data are consistent with the silencing of a pre-B cell-specific replication program in the fusion hybrid cells and independent regulation of the nuclear location of Igh loci.

Indexed as

DNA ReplicationAnimalsBase SequenceB-LymphocytesCell FusionCell Line, TumorCell NucleusGenetic MarkersHematopoietic Stem CellsHybrid CellsImmunoglobulin Heavy ChainsImmunoglobulin Variable RegionIn Situ Hybridization, FluorescenceMiceT-LymphocytesGenetic MarkersImmunoglobulin Heavy ChainsImmunoglobulin Variable Region

Identifiers

PMID16081801
PMCPMC2724393
OpenAlexW2147117995

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.