ArticleProceedings of the National Academy of Sciences of the United States of America2005
Diverse DNA transposons in rotifers of the class Bdelloidea.
Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.
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Who cites it
33 citing papers in PubMed.
- Genomic signature of sexual reproduction in the bdelloid rotifer Macrotrachella quadricornifera.Genetics · 2022Article
- Diversity and Evolution ofBiology · 2021Article
- Article
- Intruder (DD38E), a recently evolved sibling family of DD34E/Tc1 transposons in animals.Mobile DNA · 2020Article
- Traveler, a New DD35E Family of Tc1/Mariner Transposons, Invaded Vertebrates Very Recently.Genome biology and evolution · 2020Article
- The genome, transcriptome, and proteome of the fish parasite Pomphorhynchus laevis (Acanthocephala).PloS one · 2020Article
- Comparative genomics of bdelloid rotifers: Insights from desiccating and nondesiccating species.PLoS biology · 2018Article
- Molecular Evolution of piggyBac Superfamily: From Selfishness to Domestication.Genome biology and evolution · 2017Article
- TRT, a Vertebrate and Protozoan Tc1-Like Transposon: Current Activity and Horizontal Transfer.Genome biology and evolution · 2016Article
- Multitasking of the piRNA Silencing Machinery: Targeting Transposable Elements and Foreign Genes in the Bdelloid Rotifer Adineta vaga.Genetics · 2016Article
- A Novel Type Pathway-Specific Regulator and Dynamic Genome Environments of a Solanapyrone Biosynthesis Gene Cluster in the Fungus Ascochyta rabiei.Eukaryotic cell · 2015Article
- General survey of hAT transposon superfamily with highlight on hobo element in Drosophila.Genetica · 2012Article
- The struggle for life of the genome's selfish architects.Biology direct · 2011Review
- A subtelomeric non-LTR retrotransposon Hebe in the bdelloid rotifer Adineta vaga is subject to inactivation by deletions but not 5' truncations.Mobile DNA · 2010Article
- DNA transposons: nature and applications in genomics.Current genomics · 2010Article
- Origin of the cell nucleus, mitosis and sex: roles of intracellular coevolution.Biology direct · 2010Article
- Structure-based discovery and description of plant and animal Helitrons.Proceedings of the National Academy of Sciences of the United States of America · 2009Article
- A single-copy IS5-like transposon in the genome of a bdelloid rotifer.Molecular biology and evolution · 2009Article
- Automated paleontology of repetitive DNA with REANNOTATE.BMC genomics · 2008Article
- Transposition of Mboumar-9: identification of a new naturally active mariner-family transposon.Journal of molecular biology · 2008Article
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2 authors.
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No grant is acknowledged in the PubMed record.
Abstract
We surveyed the diversity, structural organization, and patterns of evolution of DNA transposons in rotifers of the class Bdelloidea, a group of basal triploblast animals that appears to have evolved for millions of years without sexual reproduction. Representatives of five superfamilies were identified: ITm (IS630/Tc/mariner), hAT, piggyBac, helitron, and foldback. Except for mariners, no fully intact copies were found. Mariners, both intact and decayed, are present in high copy number, and those described here may be grouped in several closely related lineages. Comparisons across lineages show strong evidence of purifying selection, whereas there is little or no evidence of such selection within lineages. This pattern could have resulted from repeated horizontal transfers from an exogenous source, followed by limited intragenomic proliferation, or, less plausibly, from within-host formation of new lineages under host- or element-based selection for function, in either case followed by eventual inactivation and decay. Unexpectedly, the flanking sequences surrounding the majority of mariners are very similar, indicating either insertion specificity or proliferation as part of larger DNA segments. Members of all superfamilies are present near chromosome ends, associated with the apparently domesticated retroelement Athena, in large clusters composed of diverse DNA transposons, often inserted into each other, whereas the examined gene-rich regions are nearly transposon-free.
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