Evidence map›Paper›PMID 16077119›Full record

ArticleJournal of bacteriology2005

The Escherichia coli CpxA-CpxR envelope stress response system regulates expression of the porins ompF and ompC.

Eric Batchelor, Don Walthers, Linda J Kenney, Mark Goulian

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 179 citations in OpenAlex.

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  10. Cpx-signalling innpj antimicrobials and resistance · 2024
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  11. Insights into Kinases of ESKAPE Pathogens for Therapeutic Interventions.Cardiovascular & hematological agents in medicinal chemistry · 2024
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  12. Nutrient Limitation SensitizesACS infectious diseases · 2023
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40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Eric BatchelorDepartment of Physics, University of Pennsylvania, 209 S. 33rd St., Philadelphia, PA 19104, USA.
Don Walthers
Linda J Kenney
Mark Goulian
University of Illinois Chicago · USUniversity of Pennsylvania · US

Funding

MOLECULAR CHARACTERIZATION OF PORIN GENE REGULATIONR01GM058746 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KENNEY, LINDA J. · 2000 to 2010
$2.3M
Mechanism of OmpR-dependent Transcriptional ActivationF32GM068364 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI WALTHERS, DON · 2003 to 2004
$95k
NIGMS NIH HHS F32 GM068364NIGMS NIH HHS F32-GM68364NIGMS NIH HHS GM58746NIGMS NIH HHS R01 GM058746
6 · The paper itself

Abstract

We performed transposon mutagenesis of a two-color fluorescent reporter strain to identify new regulators of the porin genes ompF and ompC in Escherichia coli. Screening of colonies by fluorescence microscopy revealed numerous mutants that exhibited interesting patterns of porin expression. One mutant harbored an insertion in the gene encoding the histidine kinase CpxA, the sensor for a two-component signaling system that responds to envelope stress. The cpxA mutant exhibited increased transcription of ompC and a very strong decrease in transcription of ompF under conditions in which acetyl phosphate levels were high. Subsequent genetic analysis revealed that this phenotype is dependent on phosphorylation of the response regulator CpxR and that activation of CpxA in wild-type cells results in similar regulation of porin expression. Using DNase I footprinting, we demonstrated that CpxR binds upstream of both the ompF and ompC promoters. It thus appears that two distinct two-component systems, CpxA-CpxR and EnvZ-OmpR, converge at the porin promoters. Within the context of envelope stress, outer membrane beta-barrel proteins have generally been associated with the sigma E pathway. However, at least for the classical porins OmpF and OmpC, our results show that the Cpx envelope stress response system plays a role in regulating their expression.

Indexed as

Bacterial Outer Membrane ProteinsBacterial ProteinsBase SequenceDeoxyribonuclease IDNA FootprintingDNA Transposable ElementsEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialMolecular Sequence DataMultienzyme ComplexesMutagenesisPorinsProtein KinasesTranscription, GeneticWater-Electrolyte BalanceBacterial Outer Membrane ProteinsBacterial ProteinsCpxA protein, E coliCpxR protein, BacteriaDeoxyribonuclease IDNA Transposable ElementsenvZ protein, E coliEscherichia coli ProteinsMultienzyme ComplexesOmpC proteinOmpF proteinPorinsProtein Kinases

Identifiers

PMID16077119
PMCPMC1196077
OpenAlexW2123724054

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.