Evidence map›Paper›PMID 16077103›Full record

ArticleJournal of bacteriology2005

The agr radiation: an early event in the evolution of staphylococci.

Jesse S Wright, Katrina E Traber, Rebecca Corrigan, Sarah A Benson, James M Musser, Richard P Novick

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 117 citations in OpenAlex.

  1. Trial
  2. Article
  3. Molecular Mechanisms of Virulence Regulation inAccounts of chemical research · 2025
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  5. Review
  6. Chemical and biomolecular insights into theIsrael journal of chemistry · 2023
    Article
  7. Analysis of the Presence of the Virulence and Regulation Genes fromInternational journal of environmental research and public health · 2023
    Article
  8. Article
  9. Reconstitution of theProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Accessory Gene Regulator (Frontiers in microbiology · 2022
    Article
  15. Article
  16. Antibiotic resistance and typing ofIranian journal of basic medical sciences · 2020
    Article
  17. Science translational medicine · 2020
    Article
  18. Toxins · 2020
    Observational
  19. Article
  20. Characterization ofmSphere · 2019
    Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jesse S WrightMolecular Pathogenesis Program and Department of Microbiology and Medicine, Skirball Institute of Biomolecular Medicine, New York University School of Medicine, 540 First Ave., New York, NY 10016, USA.
Katrina E Traber
Rebecca Corrigan
Sarah A Benson
James M Musser
Richard P Novick
New York University · USBaylor College of Medicine · US

Funding

Staphylococcal Pathogenesis and Gene ExpressionF32AI055242 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WRIGHT, JESSE S · 2003 to 2003
$48k
NIAID NIH HHS F32 AI055242NIAID NIH HHS F32AI055242PHS HHS R0142736
6 · The paper itself

Abstract

Agr is a global regulatory system in the staphylococci, operating by a classical two-component signaling module and controlling the expression of most of the genes encoding extracellular virulence factors. As it is autoinduced by a peptide, encoded within the locus, that is the ligand for the signal receptor, it is a sensor of population density or a quorum sensor and is the only known quorum-sensing system in the genus. agr is conserved throughout the staphylococci but has diverged along lines that appear to parallel speciation and subspeciation within the genus. This divergence has given rise to a novel type of interstrain and interspecies cross-inhibition that represents a fundamental aspect of the organism's biology and may be a predominant feature of the evolutionary forces that have driven it. We present evidence, using a newly developed, luciferase-based agr typing scheme, that the evolutionary divergence of the agr system was an early event in the evolution of the staphylococci and long preceded the development of the nucleotide polymorphisms presently used for genotyping. These polymorphisms developed, for the most part, within different agr groups; mobile genetic elements appear also to have diffused recently and, with a few notable exceptions, have come to reside largely indiscriminately within the several agr groups.

Indexed as

Evolution, MolecularGene Expression Regulation, BacterialBacterial ProteinsGenetic VariationGenotypeHemolysin ProteinsHemolysisLuciferasesPhenotypePromoter Regions, GeneticStaphylococcus aureusTrans-ActivatorsTranscription, GeneticAgr protein, Staphylococcus aureusBacterial ProteinsHemolysin ProteinsLuciferasesTrans-Activators

Identifiers

PMID16077103
PMCPMC1196086
OpenAlexW1993262041

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.