Evidence map›Paper›PMID 16061939›Full record

ArticleNucleic acids research2005

An Oct-1 binding site mediates activation of the gata2 promoter by BMP signaling.

Tal Oren, Ingrid Torregroza, Todd Evans

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 29 citations in OpenAlex.

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  9. Gata2, Fli1, and Scl form a recursively wired gene-regulatory circuit during early hematopoietic development.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tal OrenAlbert Einstein College of Medicine, Bronx, NY 10461, USA.
Ingrid Torregroza
Todd Evans
Albert Einstein College of Medicine · US

Funding

Regulation of Embryonic Erythropoiesis by BMP SignalingR37HL056182 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI EVANS, TODD R · 2009 to 2016
$3.2M
Regulation of Embryonic Erythropoiesis by BMP SignalingR01HL056182 · NHLBI · YESHIVA UNIVERSITY · PI EVANS, TODD R · 1997 to 2008
$3.1M
NHLBI NIH HHS HL056182NHLBI NIH HHS R01 HL056182NHLBI NIH HHS R37 HL056182
6 · The paper itself

Abstract

The gata2 gene encodes a transcription factor implicated in regulating early patterning of ectoderm and mesoderm, and later in numerous cell-specific gene expression programs. Activation of the gata2 gene during embryogenesis is dependent on the bone morphogenetic protein (BMP) signaling pathway, but the mechanism for how signaling controls gene activity has not been defined. We developed an assay in Xenopus embryos to analyze regulatory sequences of the zebrafish gata2 promoter that are necessary to mediate the response to BMP signaling during embryogenesis. We show that activation is Smad dependent, since it is blocked by expression of the inhibitory Smad6. Deletion analysis identified an octamer binding site that is necessary for BMP-mediated induction, and that interacts with the POU homeodomain protein Oct-1. However, this element is not sufficient to transfer a BMP response to a heterologous promoter, requiring an additional more proximal cooperating element. Based on recent studies with other BMP-dependent promoters (Drosophila vestigial and Xenopus Xvent-2), our studies of the gata2 gene suggest that POU-domain proteins comprise a common component of the BMP signaling pathway, cooperating with Smad proteins and other transcriptional activators.

Indexed as

Gene Expression Regulation, DevelopmentalPromoter Regions, GeneticResponse ElementsTranscriptional ActivationAnimalsBinding SitesBone Morphogenetic Protein 4Bone Morphogenetic ProteinsDNA-Binding ProteinsGATA2 Transcription FactorOctamer Transcription Factor-1Sequence DeletionSignal TransductionSmad ProteinsTrans-ActivatorsTranscription Factorsbmp4 protein, Xenopusbmp4 protein, zebrafishBone Morphogenetic Protein 4Bone Morphogenetic ProteinsDNA-Binding ProteinsGATA2 Transcription FactorOctamer Transcription Factor-1Smad ProteinsTrans-ActivatorsTranscription FactorsXenopus ProteinsZebrafish Proteins

Identifiers

PMID16061939
PMCPMC1182169
OpenAlexW2084770265

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.