Evidence map›Paper›PMID 16061821›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Mass of the postsynaptic density and enumeration of three key molecules.

Xiaobing Chen, Lucia Vinade, Richard D Leapman, Jennifer D Petersen, Terunaga Nakagawa, Terry M Phillips, Morgan Sheng, Thomas S Reese

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 118 papers.

0numbers the graph read from it
0cells of the map it votes in
118citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

118 citing papers in PubMed, 230 citations in OpenAlex.

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  12. CaMKII autophosphorylation is the only enzymatic event required for synaptic memory.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Article
  14. Synaptic memory and CaMKII.Physiological reviews · 2023
    Review
  15. Article
  16. Article
  17. Review
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  19. Article
  20. Article

58 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

Xiaobing ChenLaboratory of Neurobiology, National Institute of Neurological Disorders and Stroke, National Institutes of Health, 36 Convent Drive, MSC 4062, Bethesda, MD 20892, USA.
Lucia Vinade
Richard D Leapman
Jennifer D Petersen
Terunaga Nakagawa
Terry M Phillips
Morgan Sheng
Thomas S Reese
Universidade Federal do Rio Grande do Sul · BR

Funding

Macromolecular Architecture Of The SynapseZIANS002972 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI REESE, THOMAS S · 2009 to 2025
$25.6M
MACROMOLECULAR ARCHITECTURE OF THE SYNAPSEZ01NS002972 · NINDS · NEUROLOGICAL DISORDERS AND STROKE · PI REESE, THOMAS S · 1998 to 2008
$4.6M
CELL RECOGNITION AND SYNAPSE FORMATIONZ01HL000009 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI NIRENBERG, MARSHALL WARREN · 1985 to 2008
$4.5M
Cell Recognition And Synapse FormationZIAHL000009 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI NIRENBERG, MARSHALL WARREN · 2009 to 2010
$4.4M
MASS MAPPING OF MACROMOLECULAR ASSEMBLIESZ01OD010327 · OD · OFFICE OF THE DIRECTOR, NIH · PI LEAPMAN, RICHARD D · 1998 to 2006
–
Intramural NIH HHS
6 · The paper itself

Abstract

The total molecular mass of individual postsynaptic densities (PSDs) isolated from rat forebrain was measured by scanning transmission EM. PSDs had a mean diameter of 360 nm and molecular mass of 1.10 +/- 0.36 GDa. Because the mass represents the sum of the molecular masses of all of the molecules comprising a PSD, it becomes possible to derive the number of copies of each protein, once its relative mass contribution is known. Mass contributions of PSD-95, synapse-associated protein (SAP)97, and alpha-Ca2+/calmodulin-dependent protein kinase II (CaMKII) were determined by quantitative gel electrophoresis of PSD fractions. The number of PSD-95 molecules per average PSD, contributing 2.3% of the mass of the PSD, was calculated to be 300, whereas the number of SAP97 molecules, contributing 0.9% of the mass of the PSD, was 90. The alpha-CaMKII holoenzymes, which contribute 6% of the mass when brains are homogenized within 2 min of interrupting blood flow, have 80 holoenzymes associated with a typical PSD. When blood flow is interrupted 15 min before homogenization, the average mass of PSDs increases by approximately 40%. The additional alpha-CaMKII associated with PSDs accounts for up to 20% of this mass increase, representing the addition of 100-200 alpha-CaMKII holoenzymes.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsCalcium-Calmodulin-Dependent Protein KinasesElectrophoresisMembrane ProteinsMicroscopy, ElectronMultiprotein ComplexesNerve Tissue ProteinsProsencephalonRatsAdaptor Proteins, Signal TransducingCalcium-Calmodulin-Dependent Protein KinasesDlg1 protein, ratMembrane ProteinsMultiprotein ComplexesNerve Tissue Proteinspostsynaptic density proteins

Identifiers

PMID16061821
PMCPMC1182136
OpenAlexW2094011563

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.