Evidence map›Paper›PMID 16055730›Full record

ArticleMolecular and cellular biology2005

Condensin binding at distinct and specific chromosomal sites in the Saccharomyces cerevisiae genome.

Bi-Dar Wang, David Eyre, Munira Basrai, Michael Lichten, Alexander Strunnikov

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 107 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Condensin Accelerates Long-Range Intra-Chromosomal Interactions.bioRxiv : the preprint server for biology · 2025
    Article
  6. Cytoophidium complexes resonate with cell fates.Cellular and molecular life sciences : CMLS · 2025
    Article
  7. Article
  8. Article
  9. Quiescence inAnnual review of genetics · 2022
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Ribosomal DNA and the nucleolus in the context of genome organization.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2019
    Review
  20. Article

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Bi-Dar WangLaboratory of Gene Regulation and Development, National Institute of Child Health and Human Development, National Cancer Institute, Bethesda, MD 20892, USA.
David Eyre
Munira Basrai
Michael Lichten
Alexander Strunnikov
Health and Human Development (2HD) Research Network · CMLaboratoire de Biochimie · FRNational Cancer Institute · US

Funding

SMC PROTEINS AND OTHER CHROMOSOMAL PROTEINS IN MITOTIC CHROMOSOME SEGREGATIONZ01HD001903 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI STRUNNIKOV, ALEXANDER · 1996 to 2008
$1.3M
6 · The paper itself

Abstract

Mitotic chromosome condensation is chiefly driven by the condensin complex. The specific recognition (targeting) of chromosomal sites by condensin is an important component of its in vivo activity. We previously identified the rRNA gene cluster in Saccharomyces cerevisiae as an important condensin-binding site, but both genetic and cell biology data suggested that condensin also acts elsewhere. In order to characterize the genomic distribution of condensin-binding sites and to assess the specificity of condensin targeting, we analyzed condensin-bound sites using chromatin immunoprecipitation and hybridization to whole-genome microarrays. The genomic condensin-binding map shows preferential binding sites over the length of every chromosome. This analysis and quantitative PCR validation confirmed condensin-occupied sites across the genome and in the specialized chromatin regions: near centromeres and telomeres and in heterochromatic regions. Condensin sites were also enriched in the zones of converging DNA replication. Comparison of condensin binding in cells arrested in G(1) and mitosis revealed a cell cycle dependence of condensin binding at some sites. In mitotic cells, condensin was depleted at some sites while enriched at rRNA gene cluster, subtelomeric, and pericentromeric regions.

Indexed as

Chromosomes, FungalGenome, FungalAdenosine TriphosphatasesBinding SitesCell CycleChromatinChromatin ImmunoprecipitationChromosomesDNADNA-Binding ProteinsGenotypeMitosisModels, GeneticMultiprotein ComplexesNuclear ProteinsNucleic Acid HybridizationAdenosine TriphosphatasesChromatincondensin complexesDNADNA-Binding ProteinsMultiprotein ComplexesNuclear ProteinsNucleotidesRNA, RibosomalSaccharomyces cerevisiae Proteins

Identifiers

PMID16055730
PMCPMC1190225
OpenAlexW2139633758

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.