Evidence map›Paper›PMID 16055709›Full record

ArticleMolecular and cellular biology2005

ADAR1 interacts with NF90 through double-stranded RNA and regulates NF90-mediated gene expression independently of RNA editing.

Yongzhan Nie, Li Ding, Peter N Kao, Robert Braun, Jing-Hua Yang

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The role of ADAR1 through and beyond its editing activity in cancer.Cell communication and signaling : CCS · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. irCLASH reveals RNA substrates recognized by human ADARs.Nature structural & molecular biology · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Yongzhan NieDepartment of Surgery, Yale University School of Medicine, New Haven, CT 06520, USA.
Li Ding
Peter N Kao
Robert Braun
Jing-Hua Yang
Yale University · USStanford Medicine · USUniversity of Washington · US

Funding

THE MECHANISM AND FUNCTION OF A TO I RNA EDITINGR01GM060426 · NIGMS · YALE UNIVERSITY · PI YANG, JINGHUA · 2000 to 2004
$1.2M
Role of RNA Editing by ADAR1 in InfectionK02AI060701 · NIAID · YALE UNIVERSITY · PI YANG, JINGHUA · 2004 to 2008
$524k
NIAID NIH HHS AI060701NIAID NIH HHS K02 AI060701NIGMS NIH HHS GM-60426NIGMS NIH HHS R01 GM060426
6 · The paper itself

Abstract

The RNA-editing enzyme ADAR1 modifies adenosines by deamination and produces A-to-I mutations in mRNA. ADAR1 was recently demonstrated to function in host defense and in embryonic erythropoiesis during fetal liver development. The mechanisms for these phenotypic effects are not yet known. Here we report a novel function of ADAR1 in the regulation of gene expression by interacting with the nuclear factor 90 (NF90) proteins, known regulators that bind the antigen response recognition element (ARRE-2) and have been demonstrated to stimulate transcription and translation. ADAR1 upregulates NF90-mediated gene expression by interacting with the NF90 proteins, including NF110, NF90, and NF45. A knockdown of NF90 with small interfering RNA suppresses this function of ADAR1. Coimmunoprecipitation and double-stranded RNA (dsRNA) digestion demonstrate that ADAR1 is associated with NF110, NF90, and NF45 through the bridge of cellular dsRNA. Studies with ADAR1 deletions demonstrate that the dsRNA binding domain and a region covering the Z-DNA binding domain and the nuclear export signal comprise the complete function of ADAR1 in upregulating NF90-mediated gene expression. These data suggest that ADAR1 has the potential both to change information content through editing of mRNA and to regulate gene expression through interacting with the NF90 family proteins.

Indexed as

Gene Expression RegulationAdenosine DeaminaseAnimalsCell LineCell Line, TumorGenes, ReporterGenetic VectorsHumansImmunoblottingImmunoprecipitationLuciferasesMass SpectrometryMiceNuclear Factor 90 ProteinsPhosphoproteinsPolymerase Chain ReactionADARB1 protein, humanAdenosine DeaminaseILF3 protein, humanLuciferasesNuclear Factor 90 ProteinsPhosphoproteinsRibonucleasesRNA-Binding ProteinsRNA, Double-StrandedRNA, MessengerRNA, Small Interfering

Identifiers

PMID16055709
PMCPMC1190226
OpenAlexW2129424750

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.