Evidence map›Paper›PMID 16049479›Full record

ArticleNature2005

Systematic analysis of genes required for synapse structure and function.

Derek Sieburth, QueeLim Ch'ng, Michael Dybbs, Masoud Tavazoie, Scott Kennedy, Duo Wang, Denis Dupuy, Jean-François Rual, David E Hill, Marc Vidal and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 228 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
228citing papers in PubMed, 1 pooled it
8.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

228 citing papers in PubMed, 1 synthesis or guideline pooled it, 406 citations in OpenAlex.

  1. FMRFamide-like peptides expand the behavioral repertoire of a densely connected nervous system.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Pooled it
  2. Postsynaptic Complexin Mediates Constitutive Exocytosis of Nicotinic Acetylcholine Receptor.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  3. Article
  4. Article
  5. Natural variation suggests candidate genes underlying Caenorhabditis elegans susceptibility to diverse toxicants.Toxicological sciences : an official journal of the Society of Toxicology · 2026
    Article
  6. Article
  7. Natural variation suggests candidate genes underlyingbioRxiv : the preprint server for biology · 2025
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  15. Neuroendocrine Control of Synaptic Transmission by PHAC-1 inThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
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  20. Article

168 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Derek SieburthDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts 02114, USA.
QueeLim Ch'ng
Michael Dybbs
Masoud Tavazoie
Scott Kennedy
Duo Wang
Denis Dupuy
Jean-François Rual
David E Hill
Marc Vidal
Gary Ruvkun
Joshua M Kaplan
Dana-Farber Cancer Institute · USMassachusetts General Hospital · USHarvard University · USColumbia University · USUniversity of Wisconsin–Madison · US

Funding

Genomic analysis of C. elegans fat regulatory pathwaysR01DK070147 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI RUVKUN, GARY B · 2004 to 2012
$3.6M
NIDDK NIH HHS R01 DK070147
6 · The paper itself

Abstract

Chemical synapses are complex structures that mediate rapid intercellular signalling in the nervous system. Proteomic studies suggest that several hundred proteins will be found at synaptic specializations. Here we describe a systematic screen to identify genes required for the function or development of Caenorhabditis elegans neuromuscular junctions. A total of 185 genes were identified in an RNA interference screen for decreased acetylcholine secretion; 132 of these genes had not previously been implicated in synaptic transmission. Functional profiles for these genes were determined by comparing secretion defects observed after RNA interference under a variety of conditions. Hierarchical clustering identified groups of functionally related genes, including those involved in the synaptic vesicle cycle, neuropeptide signalling and responsiveness to phorbol esters. Twenty-four genes encoded proteins that were localized to presynaptic specializations. Loss-of-function mutations in 12 genes caused defects in presynaptic structure.

Indexed as

AldicarbAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCluster AnalysisCytoskeletonDrug ResistanceFluorescenceGene Expression ProfilingMembrane ProteinsMicrofilament ProteinsMotor NeuronsMutationNerve Tissue ProteinsNeurabinsNeuromuscular JunctionAldicarbCaenorhabditis elegans ProteinsMembrane ProteinsMicrofilament ProteinsNerve Tissue ProteinsNeurabinsNeuropeptidesPhorbol EstersR-SNARE Proteins

Identifiers

PMID16049479
OpenAlexW2084273672

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.