Evidence map›Paper›PMID 16043633›Full record

ArticleNucleic acids research2005

Incorporation of non-nucleoside triphosphate analogues opposite to an abasic site by human DNA polymerases beta and lambda.

Emmanuele Crespan, Samantha Zanoli, Anastasiya Khandazhinskaya, Igor Shevelev, Maxim Jasko, Ludmila Alexandrova, Marina Kukhanova, Giuseppina Blanca, Giuseppe Villani, Ulrich Hübscher and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Replication protein A and proliferating cell nuclear antigen coordinate DNA polymerase selection in 8-oxo-guanine repair.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Emmanuele CrespanIstituto di Genetica Molecolare IGM-CNR via Abbiategrasso 207, I-27100 Pavia, Italy.
Samantha Zanoli
Anastasiya Khandazhinskaya
Igor Shevelev
Maxim Jasko
Ludmila Alexandrova
Marina Kukhanova
Giuseppina Blanca
Giuseppe Villani
Ulrich Hübscher
Silvio Spadari
Giovanni Maga
Istituto di Genetica Molecolare · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel class of non-nucleoside triphosphate analogues, bearing hydrophobic groups sterically similar to nucleosides linked to the alpha-phosphate but lacking the chemical functional groups of nucleic acids, were tested against six different DNA polymerases (polymerases). Human polymerases alpha, beta and lambda, and Saccharomyces cerevisiae polymerase IV, were inhibited with different potencies by these analogues. On the contrary, Escherichia coli polymerase I and HIV-1 reverse transcriptase were not. Polymerase beta incorporated these derivatives in a strictly Mn++-dependent manner. On the other hand, polymerase lambda could incorporate some alkyltriphosphate derivatives with both Mg++ and Mn++, but only opposite to an abasic site on the template strand. The active site mutant polymerase lambda Y505A showed an increased ability to incorporate the analogues. These results show for the first time that neither the base nor the sugar moieties of nucleotides are required for incorporation by family X DNA polymerases.

Indexed as

DNADNA-Directed DNA PolymeraseDNA NucleotidylexotransferaseDNA Polymerase betaDNA Polymerase IEnzyme InhibitorsHumansManganeseNucleic Acid Synthesis InhibitorsNucleotidesPoint MutationPolyphosphatesSaccharomyces cerevisiae ProteinsTemplates, GeneticDNADNA-Directed DNA PolymeraseDNA NucleotidylexotransferaseDNA Polymerase betaDNA polymerase beta2DNA Polymerase IEnzyme InhibitorsManganeseNucleic Acid Synthesis InhibitorsNucleotidesPOL4 protein, S cerevisiaePolyphosphatesSaccharomyces cerevisiae Proteinstriphosphoric acid

Identifiers

PMID16043633
PMCPMC1180669
OpenAlexW2157244820

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.