Evidence map›Paper›PMID 16043510›Full record

ArticleRNA (New York, N.Y.)2005

The role of ribosome recycling factor in dissociation of 70S ribosomes into subunits.

Go Hirokawa, Romana M Nijman, V Samuel Raj, Hideko Kaji, Kazuei Igarashi, Akira Kaji

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 94 citations in OpenAlex.

  1. Article
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  9. Effects of polyamines on protein synthesis and growth ofThe Journal of biological chemistry · 2018
    Review
  10. Article
  11. Disassembly of theProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. 70S-scanning initiation is a novel and frequent initiation mode of ribosomal translation in bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Go HirokawaDepartment of Microbiology, School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Romana M Nijman
V Samuel Raj
Hideko Kaji
Kazuei Igarashi
Akira Kaji
University of Pennsylvania · USThomas Jefferson University · USChiba University · JP

Funding

RIBOSOME RECYCLING FACTOR(RRF) IN PROKARYOTESR01GM060429 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI KAJI, AKIRA · 2001 to 2004
$1.1M
NIGMS NIH HHS GM60429NIGMS NIH HHS R01 GM060429
6 · The paper itself

Abstract

Protein synthesis is initiated on ribosomal subunits. However, it is not known how 70S ribosomes are dissociated into small and large subunits. Here we show that 70S ribosomes, as well as the model post-termination complexes, are dissociated into stable subunits by cooperative action of three translation factors: ribosome recycling factor (RRF), elongation factor G (EF-G), and initiation factor 3 (IF3). The subunit dissociation is stable enough to be detected by conventional sucrose density gradient centrifugation (SDGC). GTP, but not nonhydrolyzable GTP analog, is essential in this process. We found that RRF and EF-G alone transiently dissociate 70S ribosomes. However, the transient dissociation cannot be detected by SDGC. IF3 stabilizes the dissociation by binding to the transiently formed 30S subunits, preventing re-association back to 70S ribosomes. The three-factor-dependent stable dissociation of ribosomes into subunits completes the ribosome cycle and the resulting subunits are ready for the next round of translation.

Indexed as

Protein BiosynthesisEscherichia coliEscherichia coli ProteinsGuanosine TriphosphateKineticsPeptide Elongation Factor GProkaryotic Initiation Factor-3Ribosomal ProteinsRibosomesEscherichia coli ProteinsGuanosine TriphosphatePeptide Elongation Factor GProkaryotic Initiation Factor-3Ribosomal Proteinsribosome releasing factor

Identifiers

PMID16043510
PMCPMC1370814
OpenAlexW2118060366

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.