Evidence map›Paper›PMID 16040803›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Retrograde movement of tRNAs from the cytoplasm to the nucleus in Saccharomyces cerevisiae.

Hussam H Shaheen, Anita K Hopper

Abstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers.

0numbers the graph read from it
0cells of the map it votes in
113citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

113 citing papers in PubMed, 165 citations in OpenAlex.

  1. Review
  2. Many paths to destruction: Family-specific turnover and stress responses for tRNA introns.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. RNA (New York, N.Y.) · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. tRNARNA (New York, N.Y.) · 2023
    Article
  10. The life and times of a tRNA.RNA (New York, N.Y.) · 2023
    Review
  11. Article
  12. Article
  13. A Simple Method for the Detection of Wybutosine-Modified tRNAMethods in molecular biology (Clifton, N.J.) · 2023
    Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Review
  19. Review
  20. From canonical to modified nucleotides: balancing translation and metabolism.Critical reviews in biochemistry and molecular biology · 2020
    Review

53 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Hussam H ShaheenDepartment of Biochemistry and Molecular Biology, C5757, H171, Pennsylvania State University College of Medicine, Hershey, PA 17033, USA.
Anita K Hopper
Pennsylvania State University · USUniversity of Wisconsin–Madison · US

Funding

YEAST GENES IN RNA PROCESSING &NUCLEUS/CYTOSOL EXCHANGER01GM027930 · NIGMS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI HOPPER, ANITA K · 1985 to 2014
$4.6M
NIGMS NIH HHS GM27930NIGMS NIH HHS R01 GM027930
6 · The paper itself

Abstract

In eukaryotes, tRNAs transcribed in the nucleus function in cytoplasmic protein synthesis. The Ran-GTP-binding exportin, Los1p/Xpo-t, and additional pathway(s) mediate tRNA transport to the cytoplasm. Although tRNA movement was thought to be unidirectional, recent reports that yeast precursor tRNA splicing occurs in the cytoplasm, whereas fully spliced tRNAs can reside in the nucleus, require that either the precursor tRNA splicing machinery or mature tRNAs move from the cytoplasm to the nucleus. Our data argue against the first possibility and strongly support the second. Combining heterokaryon analysis with fluorescence in situ hybridization, we show that a foreign tRNA encoded by one nucleus can move from the cytoplasm to a second nucleus that does not encode the tRNA. We also discovered nuclear accumulation of endogenous cytoplasmic tRNAs in haploid yeast cells in response to nutritional deprivation. Nuclear accumulation of cytoplasmic tRNA requires Ran and the Mtr10/Kap111 member of the importin-beta family. Retrograde tRNA nuclear import may provide a novel mechanism to regulate gene expression in eukaryotes.

Indexed as

Gene Expression Regulation, FungalActive Transport, Cell NucleusCell NucleusCytoplasmIn Situ Hybridization, FluorescenceMicroscopy, FluorescenceNuclear Pore Complex ProteinsNucleocytoplasmic Transport ProteinsOligonucleotidesran GTP-Binding ProteinRNA-Binding ProteinsRNA, TransferSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsLos1 protein, S cerevisiaeMTR10 protein, S cerevisiaeNuclear Pore Complex ProteinsNucleocytoplasmic Transport ProteinsOligonucleotidesran GTP-Binding ProteinRNA-Binding ProteinsRNA, TransferSaccharomyces cerevisiae Proteins

Identifiers

PMID16040803
PMCPMC1183567
OpenAlexW2153401759

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.