Evidence map›Paper›PMID 16030253›Full record

ArticleMolecular biology of the cell2005

Cross-talk between snurportin1 subdomains.

Jason K Ospina, Graydon B Gonsalvez, Janna Bednenko, Edward Darzynkiewicz, Larry Gerace, A Gregory Matera

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Biology open · 2018
    Article
  9. Review
  10. Review
  11. Review
  12. A day in the life of the spliceosome.Nature reviews. Molecular cell biology · 2014
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jason K OspinaDepartment of Genetics, School of Medicine, Case Western Reserve University, Cleveland, OH 44106-4955, USA.
Graydon B Gonsalvez
Janna Bednenko
Edward Darzynkiewicz
Larry Gerace
A Gregory Matera
Case Western Reserve University · USScripps Research Institute · USUniversity of Warsaw · PL

Funding

ORGANIZATION OF RIBONUCLEOPROTEINS IN MAMMALIAN CELLSR01GM053034 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MATERA, A. GREGORY · 1996 to 2015
$4.3M
Molecular Etiology of Spinal Muscular AtrophyR01NS041617 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MATERA, A. GREGORY · 2001 to 2013
$3.6M
TRAINING IN GENETICST32GM008613 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI SALZ, HELEN KAREN · 1996 to 2010
$3.1M
LEICA AOBS CONFOCAL FOR USE IN MULTI-USER FACILITY: REPRODUCTIVE BIOLOGYS10RR017980 · NCRR · CASE WESTERN RESERVE UNIVERSITY · PI HASSOLD, TERRY J · 2004 to 2004
$492k
CYTO VISION WORKSTATION FOR USE IN MULTI-USER FACILITY: CYSTIC FIBROSISS10RR021228 · NCRR · CASE WESTERN RESERVE UNIVERSITY · PI CONRAD, PATRICIA A · 2005 to 2005
$178k
NCRR NIH HHS S10 RR017980NCRR NIH HHS S10 RR021228NIGMS NIH HHS R01 GM053034NIGMS NIH HHS R01-GM53034NIGMS NIH HHS T32 GM008613NIGMS NIH HHS T32-GM08613NINDS NIH HHS R01 NS041617NINDS NIH HHS R01-NS41617
6 · The paper itself

Abstract

The initial steps of spliceosomal small nuclear ribonucleoprotein (snRNP) maturation take place in the cytoplasm. After formation of an Sm-core and a trimethylguanosine (TMG) cap, the RNPs are transported into the nucleus via the import adaptor snurportin1 (SPN) and the import receptor importin-beta. To better understand this process, we identified SPN residues that are required to mediate interactions with TMG caps, importin-beta, and the export receptor, exportin1 (Xpo1/Crm1). Mutation of a single arginine residue within the importin-beta binding domain (IBB) disrupted the interaction with importin-beta, but preserved the ability of SPN to bind Xpo1 or TMG caps. Nuclear transport assays showed that this IBB mutant is deficient for snRNP import but that import can be rescued by addition of purified survival of motor neurons (SMN) protein complexes. Conserved tryptophan residues outside of the IBB are required for TMG binding. However, SPN can be imported into the nucleus without cargo. Interestingly, SPN targets to Cajal bodies when U2 but not U1 snRNPs are imported as cargo. SPN also relocalizes to Cajal bodies upon treatment with leptomycin B. Finally, we uncovered an interaction between the N- and C-terminal domains of SPN, suggesting an autoregulatory function similar to that of importin-alpha.

Indexed as

Active Transport, Cell NucleusAmino Acid SequenceAnimalsbeta KaryopherinsCoiled BodiesConserved SequenceExportin 1 ProteinFatty Acids, UnsaturatedHeLa CellsHumansKaryopherinsMolecular Sequence DataMotor NeuronsMutationProtein BindingProtein Structure, Tertiarybeta KaryopherinsExportin 1 ProteinFatty Acids, UnsaturatedKaryopherinsleptomycin BReceptors, Cytoplasmic and NuclearRibonucleoprotein, U2 Small NuclearRNA Cap-Binding ProteinsSNUPN protein, human

Identifiers

PMID16030253
PMCPMC1237072
OpenAlexW1980071750

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.