Evidence map›Paper›PMID 16030234›Full record

ArticleJournal of bacteriology2005

The Holin protein of bacteriophage PRD1 forms a pore for small-molecule and endolysin translocation.

Gabija Ziedaite, Rimantas Daugelavicius, Jaana K H Bamford, Dennis H Bamford

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
  2. Characterization of the LysP2110-HolP2110 Lysis System inInternational journal of molecular sciences · 2023
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  7. Phage S144, A New Polyvalent Phage InfectingInternational journal of molecular sciences · 2020
    Article
  8. Review
  9. Article
  10. Genomic and Proteomic Characterizations ofFrontiers in microbiology · 2019
    Article
  11. Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Gabija ZiedaiteBiocenter 2, P.O. Box 56 (Viikinkaari 5), FIN-00014 University of Helsinki, Finland.
Rimantas Daugelavicius
Jaana K H Bamford
Dennis H Bamford
Biocenter Finland · FIUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PRD1 is a bacteriophage with an icosahedral outer protein layer surrounding the viral membrane, which encloses the linear double-stranded DNA genome. PRD1 infects gram-negative cells harboring a conjugative IncP plasmid. Here we studied the lytic functions of PRD1. Using infected cells and plasmid-borne lysis genes, we demonstrated that a two-component lysis system (holin-endolysin) operates to release progeny phage particles from the host cell. Monitoring of ion fluxes and the ATP content of the infected cells allowed us to build a model of the sequence of lysis-related physiological changes. A decrease in the intracellular level of ATP is the earliest indicator of cell lysis, followed by the leakage of K+ from the cytosol approximately 20 min prior to the decrease in culture turbidity. However, the K+ efflux does not immediately lead to the depolarization of the cytoplasmic membrane or leakage of the intracellular ATP. These effects are observed only approximately 5 to 10 min prior to cell lysis. Similar results were obtained using cells expressing the holin and endolysin genes from plasmids.

Indexed as

BacteriolysisBacteriophage PRD1Cell MembraneCell Membrane PermeabilityEndopeptidasesGenes, ViralGenetic Complementation TestIonsOnium CompoundsOrganophosphorus CompoundsPotassiumSalmonella entericaViral ProteinsendolysinEndopeptidasesIonsOnium CompoundsOrganophosphorus CompoundsP35 protein, Enterobacteria phage PRD1PotassiumtetraphenylphosphoniumViral Proteins

Identifiers

PMID16030234
PMCPMC1196050
OpenAlexW1990610623

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.