Evidence map›Paper›PMID 16030131›Full record

ArticleInternational immunology2005

Thymic expression of peripheral tissue antigens in humans: a remarkable variability among individuals.

Hiroshi Takase, Cheng-Rong Yu, Rashid M Mahdi, Daniel C Douek, Gregory B Dirusso, Frank M Midgley, Rajpreet Dogra, Gloria Allende, Eliot Rosenkranz, Alberto Pugliese and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in International immunology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 58 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Review
  5. Thymic epithelial cell heterogeneity: TEC by TEC.Nature reviews. Immunology · 2020
    Review
  6. Proteolytic dynamics of human 20S thymoproteasome.The Journal of biological chemistry · 2019
    Article
  7. Article
  8. Twenty Years of AIRE.Frontiers in immunology · 2018
    Review
  9. Tolerance Induction in Relation to the Eye.Frontiers in immunology · 2018
    Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Etiopathogenesis of insulin autoimmunity.Anatomy research international · 2012
    Article
  16. A look at autoimmunity and inflammation in the eye.The Journal of clinical investigation · 2010
    Review
  17. Cancer-associated retinopathy caused by benign thymoma.The British journal of ophthalmology · 2010
    Article
  18. Review
  19. Review
  20. Promiscuous gene expression patterns in single medullary thymic epithelial cells argue for a stochastic mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Hiroshi TakaseNational Eye Institute, NIH, Building 10, Room 10N112, Bethesda, MD 20892, USA.
Cheng-Rong Yu
Rashid M Mahdi
Daniel C Douek
Gregory B Dirusso
Frank M Midgley
Rajpreet Dogra
Gloria Allende
Eliot Rosenkranz
Alberto Pugliese
Charles E Egwuagu
Igal Gery
National Institutes of Health · USUniversity of Miami · USChildren's National · USNational Eye Institute · US

Funding

IMMUNE RESPONSES TO OCULAR ANTIGENSZ01EY000069 · NEI · NATIONAL EYE INSTITUTE · PI GERY, IGAL · 1985 to 2008
$2.7M
T LYMPHOCYTES OF THE GAMMA DELTA LINEAGE IN UVEITISZ01EY000262 · NEI · NATIONAL EYE INSTITUTE · PI EGWUAGU, CHARLES E · 1990 to 2008
$944k
Immune ReconstitutionZ01AI005031 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI DOUEK, DANIEL CESAR · 2002 to 2008
$704k
HIV Infection In Vivo And In VitroZ01AI005034 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI DOUEK, DANIEL CESAR · 2002 to 2008
$704k
Intramural NIH HHS Z99 EY999999
6 · The paper itself

Abstract

The majority of maturing T lymphocytes that recognize self-antigens is eliminated in the thymus upon exposure to their target antigens. This physiological process of negative selection requires that tissue-specific antigens be expressed by thymic cells, a phenomenon that has been well studied in experimental animals. Here, we have examined the expression in human thymi of four retinal antigens, that are capable of inducing autoimmune ocular disease retinal S-antigen (S-Ag), recoverin, RPE65 and inter-photoreceptor retinoid-binding protein (IRBP)], as well as four melanocyte-specific antigens, two of which are used as targets for melanoma immunotherapy [gp100, melanoma antigen recognized by T cells 1, tyrosinase-related protein (TRP)-1 and TRP-2]. Using reverse transcription (RT)-PCR, we found that all thymic samples from the 18 donors expressed mRNA transcripts of most or all the eight tested tissue antigens. Yet, the expression of the transcripts varied remarkably among the individual thymic samples. In addition, S-Ag, RPE65 and IRBP were detected by immunostaining in rare cells in sections of human thymi by antibodies against these proteins. Quantitative real-time RT-PCR analysis revealed that the retinal antigen transcripts in the human thymus are present at trace levels, that are lower by approximately five orders of magnitude than those in the retina. Our observations thus support the notions that thymic expression is a common feature for all tissue-specific antigens and that the levels of expression play a role in determining the susceptibility to autoimmunity against these molecules.

Indexed as

Antigens, NeoplasmArrestinAutoantigensBase SequenceCalcium-Binding ProteinsCarrier ProteinsChild, Preschoolcis-trans-IsomerasesDNA, ComplementaryEye ProteinsFemaleGene Expressiongp100 Melanoma AntigenHumansInfantLipoproteinsAntigens, NeoplasmArrestinAutoantigensCalcium-Binding ProteinsCarrier Proteinscis-trans-IsomerasesDNA, ComplementaryEye Proteinsgp100 Melanoma AntigenLipoproteinsMART-1 AntigenMembrane GlycoproteinsMLANA protein, humanNeoplasm ProteinsOxidoreductasesPMEL protein, humanRCVRN protein, humanRecoverinRetinoid IsomerohydrolaseRetinol-Binding ProteinsRetinol-Binding Proteins, InterstitialRNA, Messengertyrosinase-related protein-1

Identifiers

PMID16030131
PMCPMC2366090
OpenAlexW2130868516

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.