Evidence map›Paper›PMID 16028135›Full record

ArticleThe Journal of infectious diseases2005

Frequent detection of polyomaviruses in stool samples from hospitalized children.

John A Vanchiere, Roger K Nicome, Jewel M Greer, Gail J Demmler, Janet S Butel

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 98 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Prevalence of BK and JC Polyomaviruses among Patients with Breast Cancer.Asian Pacific journal of cancer prevention : APJCP · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Pathogenic viruses: Molecular detection and characterization.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2020
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Human polyomaviruses and cancer: an overview.Clinics (Sao Paulo, Brazil) · 2018
    Review
  14. Article
  15. Article
  16. Article
  17. Fecal Polyomavirus Excretion in Infancy.Journal of the Pediatric Infectious Diseases Society · 2016
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

John A VanchiereDepartment of Pediatrics, Section of Infectious Diseases, Baylor College of Medicine, Houston, Texas, USA. johnv@bcm.tmc.edu
Roger K Nicome
Jewel M Greer
Gail J Demmler
Janet S Butel
Baylor College of Medicine · USTexas Children's Hospital · US

Funding

SV40 Pathogenesis of Human InfectionsR01CA104818 · NCI · BAYLOR COLLEGE OF MEDICINE · PI BUTEL, JANET S · 2004 to 2008
$2.4M
The Role of Polyomaviruses in Pediatric Renal DiseasesK08DK062090 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI VANCHIERE, JOHN ANTHONY · 2002 to 2006
$603k
NCI NIH HHS CA104818NCI NIH HHS R01 CA104818NIDDK NIH HHS DK062090NIDDK NIH HHS K08 DK062090
6 · The paper itself

Abstract

backgroundInfection with BK virus (BKV) generally occurs early during life, but its mode of transmission has not been clearly defined. We tested the hypothesis that polyomavirus shedding in stool may be a source of BKV exposure.METHODS. Pediatric stool and rectal swab samples were tested for the presence of polyomavirus DNA by a polymerase chain reaction (PCR) assay that could detect a conserved region in the large T antigen gene of BKV, JC virus (JCV), and simian virus 40 (SV40). The specific viruses detected by this assay were confirmed by DNA sequence analysis of the PCR amplicons.Results. Of 120 samples collected from 99 patients, 54 (45.0%) were positive for polyomavirus DNA. Of the 99 patients, 46 (46.5%) had at least 1 positive sample, with 38 (38.4%) positive for BKV and 8 (8.1%) positive for SV40. JCV was not detected. There was no association between polyomavirus fecal shedding and age, sex, race/ethnicity, immune status, or symptoms of gastrointestinal disease in the children studied. The BKV strains detected displayed polymorphisms in the T antigen sequence.Conclusions. Polyomaviruses are frequently present in stool samples from hospitalized children. These findings suggest that fecal-oral transmission of BKV may play a role in the ubiquity of infection.

Indexed as

BK VirusSimian virus 40AdolescentBase SequenceChildChild, PreschoolFecesFemaleGenes, ViralHumansInfantMalePolyomavirus InfectionsPrevalenceSequence AlignmentTumor Virus Infections

Identifiers

PMID16028135
PMCPMC4010313
OpenAlexW2151327203

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.