Evidence map›Paper›PMID 16027731›Full record

ArticleOncogene2005

NRG1 gene rearrangements in clinical breast cancer: identification of an adjacent novel amplicon associated with poor prognosis.

Leah M Prentice, Ashleen Shadeo, Valia S Lestou, Melinda A Miller, Ronald J deLeeuw, Nikita Makretsov, Dmitry Turbin, Lindsay A Brown, Nicol Macpherson, Erika Yorida and 7 more

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Oncogene, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 67 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Neuregulin 1 Gene (Cancers · 2021
    Review
  7. NRG1 fusions in breast cancer.Breast cancer research : BCR · 2021
    Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. The minority report: targeting the rare oncogenes in NSCLC.Current treatment options in oncology · 2014
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Urine markers in monitoring for prostate cancer.Prostate cancer and prostatic diseases · 2010
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

Leah M PrenticeDepartment of Pathology and Prostate Centre, Genetic Pathology Evaluation Centre, Vancouver General Hospital, Vancouver, BC, Canada V6H 3Z6.
Ashleen Shadeo
Valia S Lestou
Melinda A Miller
Ronald J deLeeuw
Nikita Makretsov
Dmitry Turbin
Lindsay A Brown
Nicol Macpherson
Erika Yorida
Maggie C U Cheang
John Bentley
Stephen Chia
Torsten O Nielsen
C Blake Gilks
Wan Lam
David G Huntsman
BC Cancer Agency · CAUniversity of British Columbia · CAVancouver General Hospital · CAHospital for Sick Children · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rearrangements of the neuregulin (NRG1) gene have been implicated in breast carcinoma oncogenesis. To determine the frequency and clinical significance of NRG1 aberrations in clinical breast tumors, a breast cancer tissue microarray was screened for NRG1 aberrations by fluorescent in situ hybridization (FISH) using a two-color split-apart probe combination flanking the NRG1 gene. Rearrangements of NRG1 were identified in 17/382 cases by FISH, and bacterial artificial chromosome array comparative genomic hybridization was applied to five of these cases to further map the chromosome 8p abnormalities. In all five cases, there was a novel amplicon centromeric to NRG1 with a minimum common region of amplification encompassing two genes, SPFH2 and FLJ14299. Subsequent FISH analysis for the novel amplicon revealed that it was present in 63/262 cases. Abnormalities of NRG1 did not correlate with patient outcome, but the novel amplicon was associated with poor prognosis in univariate analysis, and in multivariate analysis was of prognostic significance independent of nodal status, tumor grade, estrogen receptor status, and human epidermal growth factor receptor (HER)2 overexpression. Of the two genes in the novel amplicon, expression of SPFH2 correlated most significantly with amplification. This amplicon may emerge as a result of breakpoints and chromosomal rearrangements within the NRG1 locus.

Indexed as

Gene AmplificationGene RearrangementBreast NeoplasmsChromosomes, Artificial, BacterialChromosomes, Human, Pair 8DNA, NeoplasmErb-b2 Receptor Tyrosine KinasesErbB ReceptorsFemaleGene Expression Regulation, NeoplasticHumansIn Situ Hybridization, FluorescenceMicroarray AnalysisNeuregulin-1Nuclear ProteinsNucleic Acid HybridizationDNA, NeoplasmErb-b2 Receptor Tyrosine KinasesERBB4 protein, humanErbB ReceptorsNeuregulin-1Nuclear ProteinsReceptor, ErbB-3Receptor, ErbB-4

Identifiers

PMID16027731
OpenAlexW2121850323

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.