Evidence map›Paper›PMID 16024820›Full record

ArticleGenome research2005

Random mutagenesis of proximal mouse chromosome 5 uncovers predominantly embryonic lethal mutations.

Lawriston Wilson, Yung-Hao Ching, Michael Farias, Suzanne A Hartford, Gareth Howell, Hongguang Shao, Maja Bucan, John C Schimenti

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Transcriptomic Analyses of Inner Ear Sensory Epithelia in Zebrafish.Anatomical record (Hoboken, N.J. : 2007) · 2020
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. The use of mouse models to study epigenetics.Cold Spring Harbor perspectives in biology · 2013
    Review
  12. Article
  13. Article
  14. Article
  15. Genetic causes of spermatogenic failure.Asian journal of andrology · 2012
    Review
  16. Article
  17. A Mutation inGenes · 2011
    Article
  18. Creating a "hopeful monster": mouse forward genetic screens.Methods in molecular biology (Clifton, N.J.) · 2011
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Lawriston WilsonThe Jackson Laboratory, Bar Harbor, Maine 04609, USA.
Yung-Hao Ching
Michael Farias
Suzanne A Hartford
Gareth Howell
Hongguang Shao
Maja Bucan
John C Schimenti
Cornell University · USUniversity of Pennsylvania · USJackson Laboratory · US

Funding

GENOME FUNCTION IN MOUSE WITH COMBINATION MUTAGENESISR01HD035984 · NICHD · JACKSON LABORATORY · PI SCHIMENTI, JOHN C · 1998 to 2009
$3.9M
PREECLAMPSIA LINKAGE TO PLACENTAL IMPLANTATION-PERFUSIONP01HD024180 · NICHD · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI TAYLOR, ROBERT N · 1988 to 1992
–
NICHD NIH HHS HD24180NICHD NIH HHS HD35984NICHD NIH HHS R01 HD035984
6 · The paper itself

Abstract

A region-specific ENU mutagenesis screen was conducted to elucidate the functional content of proximal mouse Chr 5. We used the visibly marked, recessive, lethal inversion Rump White (Rw) as a balancer in a three-generation breeding scheme to identify recessive mutations within the approximately 50 megabases spanned by Rw. A total of 1003 pedigrees were produced, representing the largest inversion screen performed in mice. Test-class animals, homozygous for the ENU-mutagenized proximal Chr 5 and visibly distinguishable from nonhomozygous littermates, were screened for fertility, hearing, vestibular function, DNA repair, behavior, and dysmorphology. Lethals were identifiable by failure to derive test-class animals within a pedigree. Embryonic lethal mutations (total of 34) were overwhelmingly the largest class of mutants recovered. We characterized them with respect to the time of embryonic death, revealing that most act at midgestation (8.5-10.5) or sooner. To position the mutations within the Rw region and to guide allelism tests, we performed complementation analyses with a set of new and existing chromosomal deletions, as well as standard recombinational mapping on a subset of the mutations. By pooling the data from this and other region-specific mutagenesis projects, we calculate that the mouse genome contains approximately 3479-4825 embryonic lethal genes, or about 13.7%-19% of all genes.

Indexed as

ChromosomesGenes, LethalMutationAnimalsBehavior, AnimalEmbryonic DevelopmentEthylnitrosoureaFemaleFertilityGenetic Complementation TestGestational AgeMaleMiceMice, Inbred C57BLMice, Inbred StrainsMutagenesisEthylnitrosourea

Identifiers

PMID16024820
PMCPMC1182222
OpenAlexW2159755919

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.