Evidence map›Paper›PMID 16024589›Full record

ArticleThe Plant cell2005

The evolutionarily conserved TOUGH protein is required for proper development of Arabidopsis thaliana.

Luz I A Calderon-Villalobos, Carola Kuhnle, Esther M N Dohmann, Hanbing Li, Mike Bevan, Claus Schwechheimer

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Regulation of miRNA abundance by RNA binding protein TOUGH in Arabidopsis.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  13. microRNA biogenesis and turnover in plants.Cold Spring Harbor symposia on quantitative biology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Luz I A Calderon-VillalobosCentre for Plant Molecular Biology, Developmental Genetics, Tübingen University, 72076 Tübingen, Germany.
Carola Kuhnle
Esther M N Dohmann
Hanbing Li
Mike Bevan
Claus Schwechheimer
University of Tübingen · DEJohn Innes Centre · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we characterize the evolutionarily conserved TOUGH (TGH) protein as a novel regulator required for Arabidopsis thaliana development. We initially identified TGH as a yeast two-hybrid system interactor of the transcription initiation factor TATA-box binding protein 2. TGH has apparent orthologs in all eukaryotic model organisms with the exception of the budding yeast Saccharomyces cerevisiae. TGH contains domains with strong similarity to G-patch and SWAP domains, protein domains that are characteristic of RNA binding and processing proteins. Furthermore, TGH colocalizes with the splicing regulator SRp34 to subnuclear particles. We therefore propose that TGH plays a role in RNA binding or processing. Arabidopsis tgh mutants display developmental defects, including reduced plant height, polycotyly, and reduced vascularization. We found TGH expression to be increased in the amp1-1 mutant, which is similar to tgh mutants with respect to polycotyly and defects in vascular development. Interestingly, we observed a strong genetic interaction between TGH and AMP1 in that tgh-1 amp1-1 double mutants are extremely dwarfed and severely affected in plant development in general and vascular development in particular when compared with the single mutants.

Indexed as

Evolution, MolecularAmino Acid SequenceArabidopsisArabidopsis ProteinsCarboxypeptidasesCarrier ProteinsIndoleacetic AcidsMolecular Sequence DataPlant LeavesRecombinant Fusion ProteinsSequence AlignmentTwo-Hybrid System TechniquesAMP1 protein, ArabidopsisArabidopsis ProteinsCarboxypeptidasesCarrier ProteinsIndoleacetic AcidsRecombinant Fusion ProteinsTOUGH protein, Arabidopsis

Identifiers

PMID16024589
PMCPMC1197428
OpenAlexW1976675857

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.