Evidence map›Paper›PMID 16021502›Full record

ArticlePlanta2005

Nutritional regulation of ANR1 and other root-expressed MADS-box genes in Arabidopsis thaliana.

Yinbo Gan, Sophie Filleur, Azizur Rahman, Susan Gotensparre, Brian G Forde

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 163 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Comprehensive Analysis ofInternational journal of molecular sciences · 2024
    Article
  8. Article
  9. An Overview on MADS Box Members in Plants: A Meta-Review.International journal of molecular sciences · 2024
    Review
  10. miRNA mediated regulation of nitrogen response and nitrogen use efficiency of plants: the case of wheat.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  11. Review
  12. TOE1/TOE2 Interacting with GIS to Control Trichome Development inInternational journal of molecular sciences · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. The Overexpression ofInternational journal of molecular sciences · 2021
    Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 4 countries.

Yinbo GanCentre for Novel Agricultural Products, University of York, Heslington, York, Y010 5DD, UK.
Sophie Filleur
Azizur Rahman
Susan Gotensparre
Brian G Forde
Bangladesh Agricultural University · BDCompton Community College District · USInstitut des Sciences du Végétal · FRLancaster University · GBUniversity of York · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ANR1 MADS-box gene in Arabidopsis thaliana (L.) Heynh. has previously been identified as a key regulator of lateral root growth in response to signals from external nitrate (NO3(-)). We have used quantitative real-time PCR to investigate the responsiveness of ANR1 and 11 other root-expressed MADS-box genes to fluctuations in the supply of N, P and S. ANR1 expression in roots of hydroponically grown Arabidopsis plants was specifically regulated by changes in the N supply, being induced by N deprivation and rapidly repressed by N re-supply. This pattern of N responsiveness differs from the NO3(-)-inducibility of ANR1 previously observed in Arabidopsis root cultures [H.M. Zhang and B.G. Forde (1998) Science 279:407-409]. Seven of the other MADS-box genes responded to N in a manner similar to ANR1, but less strongly, while four (AGL12, AGL17, AGL18 and AGL79) were unaffected. Six of the N-regulated genes (ANR1, AGL14, AGL16, AGL19, SOC1 and AGL21) belong to just two clades within the type II MADS-box lineage, while the other two (AGL26 and AGL56) belong to the poorly characterized type I lineage. Only SOC1 was additionally found to respond to changes in the P and S supply, suggesting a possible role in a general response to nutrient stress. Studies with an ANR1 transposon-insertion mutant provided no evidence for regulatory interactions between ANR1 and the other root-expressed MADS-box genes. The implications of the current data for our understanding of the role of ANR1 and other MADS box genes in the nutritional regulation of lateral root growth are discussed.

Indexed as

Anion Transport ProteinsArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantMutationNitratesNitrogenNutritional Physiological PhenomenaPhosphatesPlant RootsRNA, MessengerSulfurTranscription FactorsAnion Transport ProteinsANR1 protein, ArabidopsisArabidopsis ProteinsNitratesNitrogenNRT2.1 protein, ArabidopsisPhosphatesRNA, MessengerSulfurTranscription Factors

Identifiers

PMID16021502
OpenAlexW2043711009

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.