Evidence map›Paper›PMID 16014606›Full record

ArticleMolecular biology of the cell2005

Fzf1p regulates an inducible response to nitrosative stress in Saccharomyces cerevisiae.

Aaron Sarver, Joseph DeRisi

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. Zinc-Finger 5 Is an Activation Domain in theJournal of fungi (Basel, Switzerland) · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Stress Adaptation.Microbiology spectrum · 2017
    Review
  9. Adaptation ofGenetics · 2017
    Article
  10. Globins Scavenge Sulfur Trioxide Anion Radical.The Journal of biological chemistry · 2015
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Aaron SarverChemistry and Chemical Biology Graduate Program, University of California, San Francisco, San Francisco, CA 94143, USA
Joseph DeRisi
University of California, San Francisco · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mechanisms by which microorganisms sense and detoxify nitric oxide (*NO) are of particular interest due to the central role this molecule plays in innate immunity. We investigated the genetic basis of inducible nitric oxide (*NO) detoxification in Saccharomyces cerevisiae by characterizing the genome-wide transcriptional response to exogenously supplied *NO. Exposure to the *NO-generating compound dipropylenetriamine NONOate resulted in both a general stress response as well as a specific response characterized by the induction of a small set of genes, including the yeast flavohemoglobin YHB1, SSU1, and three additional uncharacterized open reading frames. Transcriptional induction of SSU1, which encodes a putative sulfite transporter, has previously been shown to require the zinc finger transcription factor Fzf1p. Deletion of Fzf1p eliminated the nitrosative stress-specific transcriptional response, whereas overexpression of Fzf1p recapitulated this response in the absence of exogenously supplied *NO. A cis-acting sequence unique to the promoter regions of Fzf1p-dependent genes was found to be sufficient to activate reporter gene activity in an *NO- and Fzf1p-dependent manner. Our results suggest that the presence of *NO or *NO derivatives activates Fzf1p leading to transcriptional induction of a discrete set of target genes that function to protect the cell from *NO-mediated stress.

Indexed as

AlkenesAmino Acid SequenceAnion Transport ProteinsBase SequenceConserved SequenceDioxygenasesGene Expression Regulation, FungalGenes, ReporterHemeproteinsMolecular Sequence DataNitric OxideNitric Oxide DonorsOligonucleotide Array Sequence AnalysisOpen Reading FramesOxidative StressPromoter Regions, GeneticAlkenesAnion Transport ProteinsDioxygenasesdipropylenetriamine-NONOateFZF1 protein, S cerevisiaeHemeproteinsNitric OxideNitric Oxide DonorsSaccharomyces cerevisiae ProteinsSsu1 protein, S cerevisiaeTranscription FactorsYHB1 protein, S cerevisiae

Identifiers

PMID16014606
PMCPMC1237083
OpenAlexW2169402853

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.