Evidence map›Paper›PMID 16002644›Full record

ArticleEukaryotic cell2005

Unique aspects of gene expression during Candida albicans mating and possible G(1) dependency.

Rui Zhao, Karla J Daniels, Shawn R Lockhart, Kathleen M Yeater, Lois L Hoyer, David R Soll

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Transcriptional Profiling ofFrontiers in cellular and infection microbiology · 2017
    Article
  6. Article
  7. Article
  8. Sexual reproduction of human fungal pathogens.Cold Spring Harbor perspectives in medicine · 2014
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Rui ZhaoDepartment of Biological Sciences, 302 BBE, The University of Iowa, Iowa City, IA 52242, USA.
Karla J Daniels
Shawn R Lockhart
Kathleen M Yeater
Lois L Hoyer
David R Soll
University of Illinois Urbana-Champaign · USUniversity of Iowa · US

Funding

THE ALS GENE FAMILY OF CANDIDA ALBICANSR01DE014158 · NIDCR · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI HOYER, LOIS L. · 2000 to 2010
$3.0M
NIAID NIH HHS AI2392NIDCR NIH HHS DE14158NIDCR NIH HHS R01 DE014158
6 · The paper itself

Abstract

Taking advantage of the high frequency of conjugation tube formation in mating mixtures and alpha-pheromone-treated a/a cells derived from saturation phase cultures of opaque cells of Candida albicans, 56 up-regulated and 30 down-regulated genes were identified employing microarray and Northern analyses. Combining these results with previous profiling studies of pheromone-induced cells, a more comprehensive transcript profile was developed for comparison with Saccharomyces cerevisiae. This comparison revealed the following: (i) that while a majority of mating-associated genes are regulated similarly between the two species, a significant minority are regulated dissimilarly; (ii) that filamentation genes are uniquely up-regulated and opaque-specific genes uniquely down-regulated during C. albicans mating; and (iii) that a newly identified class of genes is selectively down-regulated in opaque, but not white, cells that have entered saturation phase in a growth culture and then are up-regulated by pheromone. The observations that opaque cells are uniquely mating competent, that saturation phase facilitates mating, and that a newly identified group of genes is down-regulated only in opaque cells that have entered saturation phase led us to hypothesize that entering saturation phase may be requisite for mating. A test of this hypothesis revealed, however, that cells, whether in the exponential or saturation phase, may simply have to be in G(1) of the cell cycle to respond to pheromone and that the response includes G(1) arrest. These results add to the lists of similarities and dissimilarities between the mating processes of C. albicans and S. cerevisiae and underscore the unique regulation of filamentation and switching genes in the C. albicans mating process.

Indexed as

Gene Expression Regulation, FungalCandida albicansG1 PhaseGene Transfer, HorizontalMicroarray AnalysisModels, BiologicalPhenotypeTime Factors

Identifiers

PMID16002644
PMCPMC1168966
OpenAlexW2152236322

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.