Evidence map›Paper›PMID 16000451›Full record

ArticleJournal of clinical microbiology2005

Enterobacter hormaechei subsp. oharae subsp. nov., E. hormaechei subsp. hormaechei comb. nov., and E. hormaechei subsp. steigerwaltii subsp. nov., three new subspecies of clinical importance.

Harald Hoffmann, Sibylle Stindl, Wolfgang Ludwig, Anita Stumpf, Andre Mehlen, Daniel Monget, Denis Pierard, Stefan Ziesing, Jürgen Heesemann, Andreas Roggenkamp and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 94 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Structure of theMicrobiology spectrum · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Molecular detection ofVeterinarni medicina · 2024
    Article
  8. Genomic Analysis ofAntibiotics (Basel, Switzerland) · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Genome Analysis ofApplied and environmental microbiology · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Identification ofAntimicrobial agents and chemotherapy · 2021
    Article
  18. Article
  19. Dissemination of Extended-Spectrum-β-Lactamase-ProducingAntimicrobial agents and chemotherapy · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Harald HoffmannInstitute of Microbiology and Laboratory Medicine at the Pneumological Teaching Hospital of the University of Munich, Robert-Koch-Allee 2, D-82131 Gauting, Germany. Harald.Hoffmann@asklepios.com
Sibylle Stindl
Wolfgang Ludwig
Anita Stumpf
Andre Mehlen
Daniel Monget
Denis Pierard
Stefan Ziesing
Jürgen Heesemann
Andreas Roggenkamp
Karl H Schleifer
Technical University of Munich · DEAsklepios Fachkliniken München-Gauting · DELudwig-Maximilians-Universität München · DEMedizinische Hochschule Hannover · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Six species and six additional genovars are combined within the so-called Enterobacter cloacae complex, with one of them being the species Enterobacter hormaechei. In a recent population genetic study, two genetic clusters were found in close phylogenetic proximity to the genetic cluster of E. hormaechei. In order to prove the hypothesis that these three genetic clusters belong to the same species, we performed cross-hybridization experiments in microplates with DNAs of representatives of each genetic cluster. The close phylogenetic relationship among the clusters was reflected by their relatively low deltaT(m) values, ranging from 0.3 to 4.8, confirming the hypothesis that the clusters are parts of the same species. These clusters can be distinguished from the other species of the E. cloacae complex, which have deltaT(m) values of 5.6 to 10.3. Forty-eight E. hormaechei strains from the different genetic clusters were phenotypically characterized with 129 biochemical tests. In this way, E. hormaechei could be differentiated from the other species of the E. cloacae complex because it tests negative in the 3-hydroxy-butyrate test. The three genetic clusters of E. hormaechei could also be differentiated from each other by using phenotypic tests. Hence, we propose three new subspecies of E. hormaechei corresponding to genetic clusters VI, VII, and VIII of the E. cloacae complex. E. hormaechei subsp. hormaechei comb. nov. corresponds to the original species description, as it gives negative results for the adonitol, d-arabitol, d-sorbitol, and d-melibiose tests and a positive result for the dulcitol test. E. hormaechei subsp. oharae subsp. nov. gives negative results for the dulcitol, adonitol, and d-arabitol tests and positive results for the d-sorbitol and d-melibiose tests. E. hormaechei subsp. steigerwaltii subsp. nov. gives a negative result for the dulcitol test and positive results for the adonitol, d-arabitol, d-sorbitol, and d-melibiose tests. Among the members of the E. cloacae complex, E. hormaechei seems to be the species most frequently recovered from clinical specimens.

Indexed as

Bacterial Typing TechniquesChaperonin 60Child, PreschoolDNA, BacterialDNA, RibosomalEnterobacterEnterobacteriaceae InfectionsHumansMaleMiddle AgedMolecular Sequence DataNucleic Acid HybridizationPhenotypePhylogenyRNA, Ribosomal, 16SSequence Analysis, DNAChaperonin 60DNA, BacterialDNA, RibosomalRNA, Ribosomal, 16S

Identifiers

PMID16000451
PMCPMC1169129
OpenAlexW2170225163

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.