Evidence map›Paper›PMID 16000437›Full record

ArticleJournal of clinical microbiology2005

Characterization of a novel P[25],G11 human group a rotavirus.

Mustafizur Rahman, Jelle Matthijnssens, Sharifun Nahar, Goutam Podder, David A Sack, Tasnim Azim, Marc Van Ranst

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In one paragraph

Article in Journal of clinical microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
9.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 133 citations in OpenAlex.

  1. Genetic diversity of G9, G3, G8 and G1 rotavirus group A strains circulating among children with acute gastroenteritis in Vietnam from 2016 to 2021.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2024
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  13. Molecular epidemiology of rotaviruses in Bulgaria: annual shift of the predominant genotype.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2010
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  17. Occurrence of group A rotavirus mixed P genotypes infections in children living in Goiânia-Goiás, Brazil.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2008
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Mustafizur RahmanICDDR,B, Centre for Health and Population Research, Mohakhali, Dhaka-1212, Bangladesh.
Jelle Matthijnssens
Sharifun Nahar
Goutam Podder
David A Sack
Tasnim Azim
Marc Van Ranst
International Centre for Diarrhoeal Disease Research · BDKU Leuven · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel rotavirus strain (Dhaka6) isolated from a 21-year-old Bangladeshi male patient was characterized by sequence analysis of its VP7 and VP4 gene segments. Phylogenetic analysis of the VP7 gene of the Dhaka6 strain revealed a common evolutionary lineage with porcine G11 rotavirus strains. This isolate is the first reported G11 rotavirus strain infecting a human host. Comparison of the VP4 gene sequences with all currently recognized 24 different P genotypes revealed only low nucleotide (54 to 71%) and amino acid (52 to 76%) sequence identities. This lack of high sequence similarity in the VP4 gene indicates that the Dhaka6 isolate represents a new group A rotavirus P genotype, to which we propose assignment of the designation P[25].

Indexed as

AdultAmino Acid SequenceAnimalsAntigens, ViralCapsid ProteinsCattleDNA, ViralGenotypeHumansMaleMiceMolecular Sequence DataPhylogenyRotavirusRotavirus InfectionsSequence Analysis, DNAAntigens, ViralCapsid ProteinsDNA, ViralVP4 protein, RotavirusVP7 protein, Rotavirus

Identifiers

PMID16000437
PMCPMC1169153
OpenAlexW2107205310

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.