Evidence map›Paper›PMID 15996026›Full record

ArticleWorld journal of gastroenterology2005

Screening for PreS specific binding ligands with a phage displayed peptides library.

Qiang Deng, Ming Zhuang, Yu-Ying Kong, You-Hua Xie, Yuan Wang

Abstract read
In one paragraph

Article in World journal of gastroenterology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. Identification of GRP75 as a novel PreS1 binding protein using a proteomics strategy.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Qiang DengInstitute of Biochemistry and Cell Biology, 320 Yue-Yang Road, Shanghai 200031, China.
Ming Zhuang
Yu-Ying Kong
You-Hua Xie
Yuan Wang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo construct a random peptide phage display library and search for peptides that specifically bind to the PreS region of hepatitis B virus (HBV).

methodsA phage display vector, pFuse8, based on the gene 8 product (pVIII) of M13 phage was made and used to construct a random peptide library. E.coli derived thioredoxin-PreS was purified with Thio-bond beads, and exploited as the bait protein for library screening. Five rounds of bio-panning were performed. The PreS-binding specificities of enriched phages were characterized with phage ELISA assay.

resultsA phage display vector was successfully constructed as demonstrated to present a pVIII fused HBV PreS1 epitope on the phage surface with a high efficiency. A cysteine confined random peptide library was constructed containing independent clones exceeding 5+/-10(8) clone forming unit (CFU). A pool of phages showing a PreS-binding specificity was obtained after the screening against thio-PreS with an enrichment of approximately 400 times. Five phages with high PreS-binding specificities were selected and characterized. Sequences of the peptides displayed on these phages were determined.

conclusionA phage library has been constructed, with random peptides displaying as pVIII-fusion proteins. Specific PreS-binding peptides have been obtained, which may be useful for developing antivirals against HBV infection.

Indexed as

Peptide LibraryAmino Acid SequenceBase SequenceCarcinoma, HepatocellularCell Line, TumorDNA PrimersHepatitis B Surface AntigensHepatitis B virusHumansLiver NeoplasmsMolecular Sequence DataOligopeptidesProtein PrecursorsRestriction MappingViral Envelope ProteinsDNA PrimersHepatitis B Surface AntigensOligopeptidesPeptide Librarypresurface protein 2, hepatitis B surface antigenProtein PrecursorsViral Envelope Proteins

Identifiers

PMID15996026
PMCPMC4502097

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.