Evidence map›Paper›PMID 15994772›Full record

ArticleJournal of virology2005

A somatic knockout of CBF1 in a human B-cell line reveals that induction of CD21 and CCR7 by EBNA-2 is strictly CBF1 dependent and that downregulation of immunoglobulin M is partially CBF1 independent.

Sabine Maier, Maja Santak, Anja Mantik, Kristina Grabusic, Elisabeth Kremmer, Wolfgang Hammerschmidt, Bettina Kempkes

Abstract read
In one paragraph

Article in Journal of virology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 37 citations in OpenAlex.

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  12. Loss of the Notch effector RBPJ promotes tumorigenesis.The Journal of experimental medicine · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Sabine MaierInstitute of Clinical Molecular Biology, GSF National Research Center for Environment and Health, Marchioninistr. 25, D-81377 Munich, Germany.
Maja Santak
Anja Mantik
Kristina Grabusic
Elisabeth Kremmer
Wolfgang Hammerschmidt
Bettina Kempkes
Institute for Environment and Human Security · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CBF1 is a cellular highly conserved DNA binding factor that is ubiquitously expressed in all tissues and acts as a repressor of cellular genes. In Epstein-Barr virus growth-transformed B-cell lines, CBF1 serves as a central DNA adaptor molecule for several viral proteins, including the viral transactivator Epstein-Barr virus nuclear antigen 2 (EBNA-2). EBNA-2 binds to CBF1 and thereby gains access to regulatory regions of target genes and activates transcription. We have inactivated the CBF1 gene by homologous recombination in the human B-cell line DG75 and characterized changes in cellular gene expression patterns upon loss of CBF1 and activation of EBNA-2. CBF1-negative DG75 cells were viable and proliferated at wild-type rates. Loss of CBF1 was not sufficient to release repression of the previously described EBNA-2 target genes CD21 or CCR7, whereas induction of both target genes by EBNA-2 required CBF1. In contrast, repression of immunoglobulin M by EBNA-2 was mainly CBF1 independent. CBF1-negative DG75 B cells thus provide an excellent tool to dissect CBF1-dependent and -independent functions exerted by the EBNA-2 protein in future studies.

Indexed as

AllelesBurkitt LymphomaCell LineDNA-Binding ProteinsEpstein-Barr Virus Nuclear AntigensHumansImmunoglobulin J Recombination Signal Sequence-Binding ProteinImmunoglobulin MNuclear ProteinsProto-Oncogene Proteins c-mycReceptors, CCR7Receptors, ChemokineReceptors, Complement 3dViral ProteinsCCR7 protein, humanDNA-Binding ProteinsEBNA-2 protein, Human herpesvirus 4Epstein-Barr Virus Nuclear AntigensImmunoglobulin J Recombination Signal Sequence-Binding ProteinImmunoglobulin MNuclear ProteinsProto-Oncogene Proteins c-mycRBPJ protein, humanReceptors, CCR7Receptors, ChemokineReceptors, Complement 3dViral Proteins

Identifiers

PMID15994772
PMCPMC1168782
OpenAlexW2006304691

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.